Job Description P77743 Confidence 88.30% Date Thu Jan 5 12:32:24 GMT 2012 Rank 360 Aligned Residues 169 % Identity 15% Template c3ojcD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:putative aspartate/glutamate racemase; PDBTitle: crystal structure of a putative asp/glu racemase from yersinia pestis Resolution 1.75 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Query Sequence		S	V	T	R	L	F	E	L	F	R	D	I	S	L	E	F	D	H	L	A	N	I	T	P	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	F	E	K	A	V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	S	N	.	.	.	.	G	A	Y	L	K
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence		T	I	P	Y	Y	R	X	I	N	Q	H	V	K	A	Q	L	G	G	L	H	S	A	K	I	I	L	Y	S	V	D	F	H	E	I	E	Q	L	Q	A	K	G	D	W	Q	T	A	A	Q	L	L	S	N	A	A	I	S	L	K	H	A	G	A	E	V	I	V	V	C	T	N	T	X	H	K	V	A	D	D	I	E
Template Known Secondary structure																			T	T																					T	T																				T							S	S	S	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																												.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	L	S	V	P	V	I	L	I	K	P	S	G	Y	D	V	L	Q	A	L	A	K	A	G	K	L	T	S	S	I	G	V	V	T	Y	Q	E	T	I	P	A	.	.	.	L	V	A	F	Q	K	T	F	N	L	R	L	D	Q	R	S	Y	I	T	E	E	D	A	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.																		.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		A	A	C	G	L	P	L	L	H	I	A	D	A	T	A	V	Q	I	K	Q	.	.	.	.	.	Q	G	I	D	K	I	G	L	L	G	T	R	Y	T	X	E	Q	G	F	Y	R	G	R	L	T	E	K	H	G	I	E	V	I	T	P	D	D	T	D	R	E	A	V	N	R	I	I	Y	E	E	L	C	L	G	I
Template Known Secondary structure					T	S		B														.	.	.	.	.	T	T								S							S	T	T	T																														T	G	G	G	T
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.						.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
											142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																	.																								.
Query SS confidence		.	.	.	.	.	.	.	.	.																	.																								.
Query Sequence		.	.	.	.	.	.	.	.	.	R	G	Q	I	N	E	L	K	A	N	G	T	E	A	V	V	.	G	A	G	L	I	T	D	L	A	E	E	A	G	M	T	G	I	F	I	Y	S	A	A	.	T	V	R	Q	A	F	S	D	A	L	D
Query Conservation		.	.	.	.	.	.	.	.	.																	.																								.
Alig confidence		.	.	.	.	.	.	.	.	.																	.																								.
Template Conservation
Template Sequence		I	S	E	T	S	R	D	A	Y	R	R	V	I	K	K	L	E	A	Q	G	V	Q	G	I	I	F	G	C	T	E	I	T	L	L	V	N	A	Q	D	A	S	V	P	V	F	D	T	T	A	I	H	A	S	A	A	A	D	Y	A	L	Q
Template Known Secondary structure																				T	T		S						S	T								G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions