Job Description P77743 Confidence 97.90% Date Thu Jan 5 12:32:24 GMT 2012 Rank 105 Aligned Residues 203 % Identity 17% Template c3m6aC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:atp-dependent protease la 1; PDBTitle: crystal structure of bacillus subtilis lon c-terminal domain Resolution 3.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.					.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		R	Y	V	L	G	D	M	L	G	Q	S	P	Q	M	E	Q	V	R	Q	T	I	L	L	Y	A	R	S	S	A	A	.	.	.	.	V	L	I	E	G	E	T	G	T	G	K	E	L	A	A	Q	A	I	H	R	E	Y	F	A	R	H	D	A	R	Q	G	K	K	S	H	P	F	V	A	V	N	C	G	A	I	A
Query Conservation																																.	.	.	.
Alig confidence																																.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	L	D	E	E	H	H	G	L	E	K	V	K	E	R	I	L	E	Y	L	A	V	Q	K	L	T	K	S	L	K	G	P	I	L	C	L	A	G	P	P	G	V	G	K	T	S	L	A	K	S	I	A	K	S	L	.	.	.	.	.	.	.	.	.	.	.	G	R	K	F	V	R	I	S	L	G	G	R	I
Template Known Secondary structure									S	S																		S	S	S			S							S	S	S	S	S	S													.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.												.	.	.	.	.	.	.	.	380	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	L	L	E	A	E	L	F	G	Y	E	E	G	A	F	T	G	S	R	R	G	G	R	A	G	L	F	E	I	A	H	G	G	T	L	F	L	D	E	I	G	E	M	P	L	P	L	Q	T	R	L	L	R	V	L	E	E	K	E	V	T	R	V	G	G	H	Q	P	V	P	V	D	V	R	V	I	S	A	T
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		I	Q	G	M	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	G	K	L	N	P	V	F	L	L	D	E	I	D	K	M	S	A	M	L	E	.	.	V	L	D	P	E	Q	N	S	S	F	S	D	H	Y	I	E	E	T	F	D	L	S	K	V	L	F	I	A	T
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S	S	S								S	S	S					G	G	.	.	G	T		T	T	T	T	T	B				S	S	S					B		S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		405	.	.	.	.																							410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.			.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	C	N	L	E	E	D	M	Q	Q	G	R	F	R	R	D	L	F	Y	R	L	S	I	L	R	L	Q	L	P	P	L	R	E	R	V	A	D	I	L	P	L	A	E	S	F	L	K	V	S	L	A	A	L	S	A	P	F	S	A	A	L	R	Q	G	L	Q	A	S	E	T	V	L	L	H	Y	D	W	P	G	N
Query Conservation
Alig confidence						.	.	.	.	.	.														.	.										.	.
Template Conservation						.	.	.	.	.	.														.	.										.	.
Template Sequence		A	N	N	L	.	.	.	.	.	.	A	T	I	P	G	P	L	R	D	R	M	E	I	.	.	I	N	I	A	G	Y	T	E	I	.	.	E	K	L	E	I	V	K	D	H	L	L	P	K	Q	I	K	E	H	G	L	K	K	S	N	L	Q	L	R	D	Q	A	I	L	D	I	I	R	Y	Y	T	R	E	A	G
Template Known Secondary structure			S	S	T	.	.	.	.	.	.	T	T	S											.	.										.	.									T									T				G	G	G																			S	S
Template Predicted Secondary structure						.	.	.	.	.	.														.	.										.	.
Template SS confidence
		470	.	.	.							.	.	.	.	.	.	480	.	.	.	.	.	.			.	.	.	490	.	.	.	.	.			.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
		448	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	E	L	R	N	M	M	E	R	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	S	L	E	R	Q	L	A	A	I	C
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		540	.	.	.	.	.	.	.	.	.	550	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions