Job Description P77743 Confidence 85.94% Date Thu Jan 5 12:32:24 GMT 2012 Rank 408 Aligned Residues 162 % Identity 21% Template c3hfrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of glutamate racemase from listeria monocytogenes Resolution 2.30 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.												.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Query Sequence		E	L	F	R	D	I	S	L	E	F	D	H	L	A	N	I	T	P	I	Q	L	G	.	.	.	.	.	.	.	.	.	.	.	F	E	K	A	V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	S	N	G	A	Y	L	.	.	.	.	.	K	S	R	L	S	V	P	V	I	L	I	K
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.												.
Template Conservation																																																																																	.
Template Sequence		T	V	V	R	E	V	L	K	Q	L	P	H	E	Q	V	Y	Y	L	G	D	T	A	R	C	P	Y	G	P	R	D	K	E	E	V	A	K	F	T	W	E	X	T	N	F	L	V	D	R	G	I	K	X	L	V	I	A	C	N	T	A	T	A	A	A	L	Y	D	I	R	E	K	L	D	I	P	V	I	G	V	.
Template Known Secondary structure												T	T									G	G	G				T	T	S																												S																S	S					S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																		.	.	140	.	.	.	.	.	.
Predicted Secondary structure																			.	.															.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.															.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	S	G	Y	D	V	L	Q	A	L	A	K	A	G	K	L	T	.	.	S	S	I	G	V	V	T	Y	Q	E	T	I	P	A	.	.	L	V	A	F	Q	K	T	F	N	L	R	L	D	Q	R	S	Y	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	D	A	R	G	Q	I	N
Query Conservation																			.	.															.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.													.	.															.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	I	Q	P	G	S	R	A	A	L	K	A	T	R	N	N	K	I	G	V	L	G	T	L	G	T	V	E	S	X	A	Y	P	T	A	L	K	G	L	N	R	R	V	E	V	D	S	L	A	C	P	K	F	V	S	V	V	E	S	G	E	Y	K	S	A	I	A	K	K	V	V	A	E	S	L	L
Template Known Secondary structure		.	.	.	.	.													S	S	S														T											T	T									T	T							T	T		T	T	S												G
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.		.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure													.		.	.	.	.
Query SS confidence													.		.	.	.	.
Query Sequence		E	L	K	A	N	G	T	E	A	V	V	.	G	.	.	.	.	A	G	L	I	T	D	L	A	E	E	A	G	M	T	G	I	F	I	Y	S	A	A	T	V	R	Q	A	F	S	D	A	L	D
Query Conservation													.		.	.	.	.
Alig confidence													.		.	.	.	.
Template Conservation
Template Sequence		P	L	K	S	T	K	I	D	T	V	I	L	G	C	T	H	Y	P	L	L	K	P	I	I	E	N	F	X	G	D	G	V	A	V	I	N	S	G	E	E	T	A	S	E	V	S	A	L	L	D
Template Known Secondary structure		G	G	G	G	S									S	T	T	G	G	G	G										T	T	S					T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions