Return to main results Retrieve Phyre Job Id

Job DescriptionP77743
Confidence93.51%DateThu Jan 5 12:32:24 GMT 2012
Rank154Aligned Residues33
% Identity21%Templatec3crqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242.......250.........260.........270.........280.......
Predicted Secondary structure 





















Query SS confidence 













































Query Sequence  VLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIA
Query Conservation 


 

 



   
  

  
         
   


 


    
Alig confidence 

















.............














Template Conservation 
 
 







 

  
.............
     






 
Template Sequence  IFLMGPTAAGKTDLAMAL. . . . . . . . . . . . . ADALPCELISVDSAL
Template Known Secondary structure 
STTSS.............TTS


TTT
Template Predicted Secondary structure 





.............




Template SS confidence 













































   8.10.........20..... ....30.........40
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions