Job Description P77743 Confidence 99.58% Date Thu Jan 5 12:32:24 GMT 2012 Rank 32 Aligned Residues 200 % Identity 17% Template c3bosA_ PDB info PDB header:hydrolase regulator,dna binding protein Chain: A: PDB Molecule:putative dna replication factor; PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution Resolution 1.75 Å

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		209	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	R	T	R	Y	V	L	G	D	.	M	L	G	Q	S	P	Q	M	E	Q	V	R	Q	T	I	L	L	Y	A	R	S	S	A	A	V	L	I	E	G	E	T	G	T	G	K	E	L	A	A	Q	A	I	H	R	E	Y	F	A	R	H	D	A	R	Q	G	K	K	S	H	P	F	V	A	V	N	C	G	A	I	A
Query Conservation											.
Alig confidence											.																	.	.																													.	.	.	.	.	.	.	.
Template Conservation																												.	.																													.	.	.	.	.	.	.	.
Template Sequence		L	P	D	D	E	T	F	T	S	Y	Y	P	G	N	D	E	L	I	G	A	L	K	S	A	A	S	.	.	G	D	G	V	Q	A	I	Y	L	W	G	P	V	K	S	G	R	T	H	L	I	H	A	A	C	A	R	A	.	.	.	.	.	.	.	.	N	E	L	E	R	R	S	F	Y	I	P	L	G	I	H	A
Template Known Secondary structure				T	T		S	T	T	T	S																	.	.	T		S		S							S	T	T	S	S													.	.	.	.	.	.	.	.			T	T								G	G	G	G	G
Template Predicted Secondary structure																												.	.																													.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.									.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	L	L	E	A	E	L	F	G	Y	E	E	G	A	F	T	G	S	R	R	G	G	R	A	G	L	F	E	I	A	H	G	G	T	L	F	L	D	E	I	G	E	M	P	L	P	L	Q	T	R	L	L	R	V	L	E	E	K	E	V	T	R	V	G	G	H	Q	P	V	P	V	D	V	R	V	I	S	A	T
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	S	T	A	L	L	E	G	L	E	Q	F	D	L	I	C	I	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	A	V	A	G	H	P	L	W	E	E	A	I	F	D	L	Y	N	R	V	A	E	Q	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	L	I	V	S	A
Template Known Secondary structure		G	S		G	G	G	G	T	T	G	G	G	S	S						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	T	T																				S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.															.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.														.	.	140	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		H	C	N	L	E	E	D	M	Q	Q	G	R	F	R	R	D	L	F	Y	R	L	S	.	I	L	R	L	Q	L	P	P	L	R	E	R	V	A	D	I	L	P	L	A	E	S	F	L	K	V	S	L	A	A	L	S	A	P	F	S	A	A	L	R	Q	G	L	Q	A	S	E	T	V	L	L	H	Y	D	W	P	G
Query Conservation																								.
Alig confidence										.	.	.												.														.	.	.	.	.	.																.	.	.	.	.	.	.													.
Template Conservation										.	.	.																										.	.	.	.	.	.																.	.	.	.	.	.	.													.
Template Sequence		S	A	S	P	X	E	A	G	.	.	.	F	V	L	P	D	L	V	S	R	X	H	W	G	L	T	Y	Q	L	Q	P	X	X	D	D	E	.	.	.	.	.	.	K	L	A	A	L	Q	R	R	A	A	X	R	G	L	Q	.	.	.	.	.	.	.	L	P	E	D	V	G	R	F	L	L	N	R	.	X	A	R
Template Known Secondary structure		S	S		T	T	T	T	T	.	.	.													S										G	G	G	.	.	.	.	.	.												T	T			.	.	.	.	.	.	.													.	T	T	T
Template Predicted Secondary structure										.	.	.																										.	.	.	.	.	.																.	.	.	.	.	.	.													.
Template SS confidence
		145	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.		.	.	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	R	E	L	R	N	M	M	E	R	L	A	L	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	R	T	L	F	D	V	L	D	R	L	D	K	A	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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