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Job DescriptionP77743
Confidence98.99%DateThu Jan 5 12:32:24 GMT 2012
Rank73Aligned Residues190
% Identity27%Templatec2qz4A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:paraplegin; PDBTitle: human paraplegin, aaa domain in complex with adp
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   214.....220.........230..... ....240.........250.........260.........270.........280.........
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Query Sequence  VLGDMLGQSPQMEQVRQTILLY. . . . ARSSAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIAES
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Template Sequence  SFKDVAGMHEAKLEVREFVDYLKSPEAKVPKGALLLGPPGCGKTLLAKAVATEA. . . . . . . . . . . QVPFLAMAGAEFVEV
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S
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   307..310.........320.........330.........340.........350.........360 .........370.....
 
   290.........300.........310........ .320.........330.........340.........350.........360......
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Query Sequence  LLEAELFGYEEGAFTGSRRGGRAGLFEIA. . . HGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPVPVDVRVISA
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Template Sequence  . . . . . . . . . . . . . IGGLGAARVRSLFKEARARAPCIVYIDEIEQTLNQLLVEMDGMGTTDH. . . . . . . . . . . . . VIVLAS
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   382.......390.........400.........410.........420......... 430.....
 
   367..370.. .......380.........390.........400.........410.........420.........430.........440...
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Query Sequence  THCNLE. . . EDMQQGRFRRDLFYRLSILRLQLPPLRERVADILPLAESFLKVSLAALSAPFSAALRQGLQASETVLLHYD
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Template Sequence  TNRADILDGALMRPGRLDR. . . . . . . HVFIDLPTLQERRE. . . . . . . . IFEQHLKSLKLT. . . . . . . QSSTFYSQRLAEL
Template Known Secondary structure  S
GGGGGSGGGSTTS

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   455....460.........470... ......480....... ..490......... 500.........510..
 
   444.. ...450.........460..
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Query Sequence  WPG. NIRELRNMMERLALFL
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Template Sequence  TPGFSGADIANICNEAALHV
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   513......520.........530..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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