Job Description P77743 Confidence 87.84% Date Thu Jan 5 12:32:24 GMT 2012 Rank 370 Aligned Residues 178 % Identity 15% Template c2gzmB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of the glutamate racemase from bacillus2 anthracis Resolution 1.99 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.												.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Query Sequence		D	K	P	V	I	W	T	V	S	V	T	R	L	F	E	L	F	R	D	I	S	L	E	F	D	H	L	A	N	I	T	P	I	Q	L	G	.	.	.	.	.	.	.	.	.	.	.	F	E	K	A	V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	S	N	G	.	.	.	.	.	A
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation
Template Sequence		N	R	A	I	G	V	I	D	S	G	V	G	G	L	T	V	A	K	E	L	I	R	Q	L	P	K	E	R	I	I	Y	L	G	D	T	A	R	C	P	Y	G	P	R	S	R	E	E	V	R	Q	F	T	W	E	M	T	E	H	L	L	D	L	N	I	K	M	L	V	I	A	C	N	T	A	T	A	V	V	L	E
Template Known Secondary structure		T	S							S	S	S	T	T												T	T	S								G	G	G				T	T	S																		T	T			S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	L	K	S	R	L	S	V	P	V	I	L	I	K	P	S	G	Y	D	V	L	Q	A	L	A	K	A	G	K	L	T	S	S	I	G	V	V	T	Y	Q	E	T	I	P	A	.	.	L	V	A	F	Q	K	T	F	N	L	R	L	D	Q	R	S	Y	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.																												.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		E	M	Q	K	Q	L	P	I	P	V	V	G	V	I	.	.	.	.	H	P	G	S	R	T	A	L	K	V	T	N	T	Y	H	V	G	I	I	G	T	I	G	T	V	K	S	G	A	Y	E	E	A	L	K	S	I	N	N	R	V	M	V	E	S	L	A	C	P	P	F	V	E	L	V	E	S	G	N	F	E	S
Template Known Secondary structure								S	S					S		.	.	.	.												S	S															T											T	T									T	T							T	T		S	S	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
					138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure		.	.	.																					.	.		.	.	.
Query SS confidence		.	.	.																					.	.		.	.	.
Query Sequence		.	.	.	E	E	D	A	R	G	Q	I	N	E	L	K	A	N	G	T	E	A	V	V	.	.	G	.	.	.	A	G	L	I	T	D	L	A	E	E	A	G	M	T	G	I	F	I	Y	S	A	A	T	V	R	Q	A	F	S	D	A	L	D
Query Conservation		.	.	.																					.	.		.	.	.
Alig confidence		.	.	.																					.	.		.	.	.
Template Conservation
Template Sequence		E	M	A	Y	E	V	V	R	E	T	L	Q	P	L	K	N	T	D	I	D	T	L	I	L	G	C	T	H	Y	P	I	L	G	P	V	I	K	Q	V	M	G	D	K	V	Q	L	I	S	S	G	D	E	T	A	R	E	V	S	T	I	L	Y
Template Known Secondary structure																	S	S			S						S	T	T	G	G	G	G										T	T	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions