Job Description P77743 Confidence 88.14% Date Thu Jan 5 12:32:24 GMT 2012 Rank 363 Aligned Residues 175 % Identity 15% Template c2dx7B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:aspartate racemase; PDBTitle: crystal structure of pyrococcus horikoshii ot3 aspartate racemase2 complex with citric acid Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.
Query SS confidence																																																																									.	.	.	.
Query Sequence		A	H	P	P	R	L	N	D	D	K	P	V	I	W	T	V	S	V	T	R	L	F	E	L	F	R	D	I	S	L	E	F	D	H	L	A	N	I	T	P	I	Q	L	G	F	E	K	A	V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	S	N	G	.	.	.	.	A	Y	L	K	S
Query Conservation																																																																									.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	P	A	K	R	D	Q	E	H	P	K	V	I	I	F	N	N	P	Q	I	P	D	R	T	A	Y	I	L	G	K	G	E	D	P	.	.	.	.	.	.	.	.	.	.	R	P	Q	L	I	W	T	A	K	R	L	E	E	C	G	A	D	F	I	I	M	P	A	N	T	A	H	A	F	V	E	D	I	R	K
Template Known Secondary structure		T	S			S	S	G	G	G	S									T	T	S									S	S					.	.	.	.	.	.	.	.	.	.															T		S							S	G	G	G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.											60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	S	V	P	V	I	L	I	K	P	S	G	Y	D	V	L	Q	A	L	A	K	A	G	K	L	T	S	S	I	G	V	V	T	Y	Q	E	T	I	P	A	L	V	A	F	Q	K	T	F	N	L	R	L	D	Q	R	S	Y	I	T	E	E	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		A	I	K	I	P	I	I	S	M	I	E	E	T	.	.	.	.	.	A	K	K	V	K	E	L	G	F	K	K	A	G	L	L	A	T	T	G	T	I	V	S	G	V	Y	E	K	E	F	S	K	Y	G	V	E	I	M	T	P	T	E	D	E	Q	K	D	V	M	R	G	I	Y	E	G	V	K	A	G	N	L	K
Template Known Secondary structure				S	S		B								.	.	.	.	.							T	T		S														T									T	T																								T	T
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
								142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure		.	.	.	.	.	.																	.																								.
Query SS confidence		.	.	.	.	.	.																	.																								.
Query Sequence		.	.	.	.	.	.	R	G	Q	I	N	E	L	K	A	N	G	T	E	A	V	V	.	G	A	G	L	I	T	D	L	A	E	E	A	G	M	T	G	I	F	I	Y	S	A	A	.	T	V	R	Q	A	F	S	D	A	L	D
Query Conservation		.	.	.	.	.	.																	.																								.
Alig confidence		.	.	.	.	.	.																	.																								.
Template Conservation
Template Sequence		L	G	R	E	L	L	L	K	T	A	K	I	L	E	E	R	G	A	E	C	I	I	A	G	C	T	E	V	S	V	V	L	K	Q	D	D	L	K	V	P	L	I	D	P	M	D	V	I	A	E	V	A	V	K	V	A	L	E
Template Known Secondary structure																	T	T		S	S					S									G	G	G		S	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions