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Job DescriptionP77743
Confidence99.38%DateThu Jan 5 12:32:24 GMT 2012
Rank40Aligned Residues195
% Identity25%Templatec2dhrC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:ftsh; PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l)
Resolution3.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   214.....220.........230........ .240.........250.........260.........270.........280...
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Query Sequence  VLGDMLGQSPQMEQVRQTILLYARS. . . . . . . . . . SAAVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNC
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Template Sequence  TFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEA. . . . . . . . . . . RVPFITASG
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   154.....160.........170.........180.........190.........200.........210... ......220..
 
   284.....290.........300.........310......... 320.........330.. .......340......
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Query Sequence  GAIAESLLEAELFGYEEGAFTGSRRGGRAGLFEIAH. . . GGTLFLDEIGEMP. . . . . . . . . . . . . . LPLQTRLLRVLEEK
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Template Sequence  SDFVEM. . . . . . . . . . . . . FVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGF
Template Known Secondary structure  GGGTSS.............
TTTTSTTSSS

GGGT


SSSSTTTSSGGG
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   223..... .230.........240.........250.........260.........270.........280.........
 
   347..350.........360.........370.........380.........390.........400.........410.........420......
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Query Sequence  EVTRVGGHQPVPVDVRVISATHCNLEEDMQQGRFRRDLFYRLSILRLQLPPLRERVADILPLAESFLKVSLAALSAPFSA
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Template Sequence  E. . . . . . . . . KDTAIVVMAATNRP. . DILDPALLRPGRFDR. . QIAIDAPDVKGREQ. . . . . . . . ILRIHARGKPL. . . .
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   290 .........300.... .....310......... 320.........330... ......340....
 
   427..430.........440...... ...450.........460..
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Query Sequence  ALRQGLQASETVLLHYDWPG. NIRELRNMMERLALFL
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Template Sequence  . . . . AEDVDLALLAKR. TPGFVGADLENLLNEAALLA
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   345....350...... ...360.........370......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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