Job Description P77743 Confidence 98.87% Date Thu Jan 5 12:32:24 GMT 2012 Rank 84 Aligned Residues 192 % Identity 24% Template c1iy2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh; PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.											.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	G	D	M	L	G	Q	S	P	Q	M	E	Q	V	R	Q	T	I	L	L	Y	.	.	.	.	.	.	.	.	.	.	A	R	S	S	A	A	V	L	I	E	G	E	T	G	T	G	K	E	L	A	A	Q	A	I	H	R	E	Y	F	A	R	H	D	A	R	Q	G	K	K	S	H	P	F	V	A	V	N	C
Query Conservation																								.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	F	K	D	V	A	G	A	E	E	A	K	E	E	L	K	E	I	V	E	F	L	K	N	P	S	R	F	H	E	M	G	A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	A	.	.	.	.	.	.	.	.	.	.	.	R	V	P	F	I	T	A	S	G
Template Known Secondary structure			G	G	G	S	S	S																								T	T													T	T	S	S												T	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.												.	.	.	.	.	.	220	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.				.	320	.	.	.	.	.	.	.	.	.	330	.							.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																																					.	.	.														.	.	.	.	.	.
Query SS confidence																																					.	.	.														.	.	.	.	.	.
Query Sequence		G	A	I	A	E	S	L	L	E	A	E	L	F	G	Y	E	E	G	A	F	T	G	S	R	R	G	G	R	A	G	L	F	E	I	A	.	.	.	H	G	G	T	L	F	L	D	E	I	G	E	M	.	.	.	.	.	.	P	L	P	L	Q	T	R	L	L	R	V	L	E	E	K	E	V	T	R	V	G	G	H
Query Conservation																																					.	.	.														.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.														.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Template Sequence		S	D	F	V	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	G	V	G	A	A	R	V	R	D	L	F	E	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	G	F	E	.	.	.	.	.	.	.
Template Known Secondary structure							S	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T															T	S		S							T																							T	T			.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.														.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.				.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		Q	P	V	P	V	D	V	R	V	I	S	A	T	H	C	N	L	E	E	D	M	Q	Q	G	R	F	R	R	D	L	F	Y	R	L	.	.	.	S	I	L	R	L	Q	L	P	P	L	R	E	R	V	A	D	I	L	P	L	A	E	S	F	L	K	V	S	L	A	A	L	S	A	P	F	S	A	A	L	R	Q	G
Query Conservation																																				.	.	.
Alig confidence		.	.															.	.	.	.	.	.	.												.	.	.																.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation		.	.															.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Sequence		.	.	K	D	T	A	I	V	V	M	A	A	T	N	R	P	.	.	.	.	.	.	.	D	I	L	D	P	A	L	L	R	P	G	R	F	D	R	Q	I	A	I	D	A	P	D	V	K	G	R	E	Q	.	.	.	.	.	.	.	.	I	L	R	I	H	A	R	G	K	P	L	.	.	.	.	.	.	.	.	A
Template Known Secondary structure		.	.	T	T										S		T	.	.	.	.	.	.	.	T	S	S						S	T	T	S	S																	.	.	.	.	.	.	.	.							T	T	S		B	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.															.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template SS confidence
				291	.	.	.	.	.	.	.	.	300	.	.	.	.								.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.									.	.	.	.	.	.	340	.	.	.	.									.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		L	Q	A	S	E	T	V	L	L	H	Y	D	W	P	G	.	N	I	R	E	L	R	N	M	M	E	R	L	A	L	F	L
Query Conservation																	.
Alig confidence													.				.
Template Conservation													.
Template Sequence		E	D	V	D	L	A	L	L	A	K	R	.	T	P	G	F	V	G	A	D	L	E	N	L	L	N	E	A	A	L	L	A
Template Known Secondary structure		T	T									T	.		T	T
Template Predicted Secondary structure													.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions