Job Description P77743 Confidence 98.96% Date Thu Jan 5 12:32:24 GMT 2012 Rank 77 Aligned Residues 194 % Identity 21% Template c1iqpF_ PDB info PDB header:replication Chain: F: PDB Molecule:rfcs; PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus Resolution 2.80 Å

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	G	D	M	L	G	Q	S	P	Q	M	E	Q	V	R	Q	T	I	L	L	Y	A	R	S	S	A	A	V	L	I	E	G	E	T	G	T	G	K	E	L	A	A	Q	A	I	H	R	E	Y	F	A	R	H	D	A	R	Q	G	K	K	S	H	P	F	V	A	V	N	C	G	A	I	A	E	S	L	L	E	A
Query Conservation
Alig confidence																						.	.																															.	.	.	.	.	.
Template Conservation																						.	.																															.	.	.	.	.	.
Template Sequence		R	L	D	D	I	V	G	Q	E	H	I	V	K	R	L	K	H	Y	V	K	.	.	T	G	S	M	P	H	L	L	F	A	G	P	P	G	V	G	K	T	T	A	A	L	A	L	A	R	E	L	F	G	.	.	.	.	.	.	E	N	W	R	H	N	F	L	E	L	N	A	S	D	E	R	G	I	N	V	I	R
Template Known Secondary structure		S	G	G	G			S													T	.	.	T	T									S		T	T	S	S	T	T												G	.	.	.	.	.	.	G	G										T	T	T	S	S
Template Predicted Secondary structure																						.	.																															.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.							.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	F	G	Y	E	E	G	A	F	T	G	S	R	R	G	G	R	A	G	L	F	E	I	A	H	G	G	T	L	F	L	D	E	I	G	E	M	P	L	P	L	Q	T	R	L	L	R	V	L	E	E	K	E	V	T	R	V	G	G	H	Q	P	V	P	V	D	V	R	V	I	S	A	T	H	C	N	L	E	E
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		E	K	V	K	E	F	A	R	T	K	P	I	G	G	A	S	F	K	.	.	.	.	.	.	.	.	.	.	I	I	F	L	D	E	A	D	A	L	T	Q	D	A	Q	Q	A	L	R	R	T	M	E	M	.	.	.	.	.	.	.	.	.	.	.	F	S	S	N	V	R	F	I	L	S	C	N	Y	S	S	.	.
Template Known Secondary structure								T	T	S			S	S	S		S			.	.	.	.	.	.	.	.	.	.						T	G	G	G	S															.	.	.	.	.	.	.	.	.	.	.	T	T	T	T								S		G	G	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.											.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.												.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	Q	Q	G	R	F	R	R	D	L	F	Y	R	L	S	I	L	R	L	Q	L	P	P	L	R	E	R	V	A	D	I	L	P	L	A	E	S	F	L	K	V	S	L	A	A	L	S	A	P	F	S	A	A	L	R	Q	G	L	Q	A	S	E	T	V	L	L	H	Y	D	W	P	G	N	I	R	E	L	R	N
Query Conservation
Alig confidence		.	.	.	.	.																										.	.	.	.	.	.	.	.													.	.	.	.	.	.	.														.
Template Conservation		.	.	.	.	.																										.	.	.	.	.	.	.	.													.	.	.	.	.	.	.														.
Template Sequence		.	.	.	.	.	K	I	I	E	P	I	Q	S	R	C	A	I	F	R	F	R	P	L	R	D	E	D	I	A	K	.	.	.	.	.	.	.	.	R	L	R	Y	I	A	E	N	E	G	L	E	.	.	.	.	.	.	.	L	T	E	E	G	L	Q	A	I	L	Y	I	A	.	E	G	D	M	R	R	A	I	N
Template Known Secondary structure		.	.	.	.	.	G	S						T	T																	.	.	.	.	.	.	.	.										T			.	.	.	.	.	.	.														.	T	T
Template Predicted Secondary structure		.	.	.	.	.																										.	.	.	.	.	.	.	.													.	.	.	.	.	.	.														.
Template SS confidence
							152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.									.	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210
		454	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	E	R	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	Q	A	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions