Job Description P77743 Confidence 99.64% Date Thu Jan 5 12:32:24 GMT 2012 Rank 25 Aligned Residues 271 % Identity 18% Template c1hqcB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:ruvb; PDBTitle: structure of ruvb from thermus thermophilus hb8 Resolution 3.20 Å

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		V	L	G	D	M	L	G	Q	S	P	Q	M	E	Q	V	R	Q	T	I	L	L	Y	.	.	.	A	R	S	S	A	A	V	L	I	E	G	E	T	G	T	G	K	E	L	A	A	Q	A	I	H	R	E	Y	F	A	R	H	D	A	R	Q	G	K	K	S	H	P	F	V	A	V	N	C	G	A	I	A	E	S	L
Query Conservation																								.	.	.
Alig confidence																								.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	D	E	Y	I	G	Q	E	R	L	K	Q	K	L	R	V	Y	L	E	A	A	K	A	R	K	E	P	L	E	H	L	L	L	F	G	P	P	G	L	G	K	T	T	L	A	H	V	I	A	H	E	L	.	.	.	.	.	.	.	.	.	.	.	G	V	N	L	R	V	T	S	G	P	A	I	E	K	P	G
Template Known Secondary structure		S	T	T	T	S		S																	S	S		S											T	T															.	.	.	.	.	.	.	.	.	.	.	T								T	T	T			S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.												.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	E	L	F	G	Y	E	E	G	A	F	T	G	S	R	R	G	G	R	A	G	L	F	E	I	A	H	G	G	T	L	F	L	D	E	I	G	E	M	P	L	P	L	Q	T	R	L	L	R	V	L	E	E	K	E	V	T	R	V	G	G	H	Q	P	V	P	V	D	V	R	V	I	S	A	T	H	C	N
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	A	A	I	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	L	E	E	G	D	I	L	F	I	D	E	I	H	R	L	S	R	Q	A	E	E	H	L	Y	P	A	M	E	D	F	V	M	D	I	V	I	G	Q	G	P	A	A	R	T	I	R	L	E	L	P	R	F	T	L
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T			T	T						T	T	T	T	S																S						B	S	S	S	S	S		B
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.																		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	E	D	M	Q	Q	G	R	F	R	R	D	L	F	Y	R	L	S	I	L	R	L	Q	L	P	P	L	R	E	R	V	A	D	I	L	P	L	A	E	S	F	L	K	V	S	L	A	A	L	S	A	P	F	S	A	A	L	R	Q	G	L	Q	A	S	E	T	V	L	L	H	Y	D	W	P	G	N	I	R	E
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.												.	.	.	.	.	.	.													.
Template Conservation																																					.	.	.	.	.	.	.												.	.	.	.	.	.	.													.
Template Sequence		I	G	A	T	T	R	P	G	L	I	T	A	P	L	L	S	R	F	G	I	V	E	H	L	E	Y	Y	T	P	E	E	L	A	Q	G	.	.	.	.	.	.	.	V	M	R	D	A	R	L	L	G	V	R	.	.	.	.	.	.	.	I	T	E	E	A	A	L	E	I	G	R	R	.	S	R	G	T	M	R	V
Template Known Secondary structure						S	S		S	S		S		S	T	T	T	T		S																	.	.	.	.	.	.	.							T	T	S			.	.	.	.	.	.	.	B												.	S		S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.												.	.	.	.	.	.	.													.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.								.	.	.	180	.	.	.	.	.	.	.								.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.				.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		L	R	N	M	M	E	R	L	A	L	F	L	S	V	E	P	T	P	D	L	T	P	Q	F	M	Q	L	L	L	P	E	L	A	R	E	S	A	K	T	P	A	P	R	L	L	T	P	Q	Q	A	L	E	K	F	N	G	D	.	.	.	K	T	A	A	A	N	Y	L	G	I	S	R	T	T	F	W	R	R	L	K
Query Conservation																																																											.	.	.
Alig confidence																																																											.	.	.
Template Conservation
Template Sequence		A	K	R	L	F	R	R	V	R	D	F	A	Q	V	A	G	E	E	V	I	T	R	E	R	A	L	E	A	L	A	A	L	G	L	D	E	L	G	L	E	K	R	D	R	E	I	L	E	V	L	I	L	R	F	G	G	G	P	V	G	L	A	T	L	A	T	A	L	S	E	D	P	G	T	L	E	E	V	H	E
Template Known Secondary structure										T	T	T	S	S		S	S	S	S		B													T			T	T																	S		S	S											T	T	S									T
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions