Phyre 2 alignment of Q46812 with d2qs8a2

Job Description Q46812
Confidence 99.72% Date Thu Jan 5 12:34:40 GMT 2012

Rank 70 Aligned Residues 281

% Identity 14% Template d2qs8a2

SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Zn-dependent arginine carboxypeptidase-like

Resolution 2.33

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	I	V	C	S	H	N	H	F	Y	S	G	L	S	R	G	I	M	A	N	I	A	P	C	P	D	F	I	S	T	L	K	N	L	W	W	R	L	D	R	A	L	D	E	E	S	L	Y	Y	S	G	L	I	C	S	L	E	A	I	K	S	G	C	T	S	V	I	D	H	H	A	S	P	A	Y	I	G	G	S	L
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence	G	L	X	D	X	H	V	H	F	G	Q	E	Y	Q	S	K	A	Q	A	P	I	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	E	X	Q	A	I	L	A	T	Q	H	A	Y	V	T	F	K	S	G	F	T	T	V	R	Q	V	G	.	D	S	G	L	V	A	I	S	L
Template Known Secondary structure									T	T						T	T	T	S		S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T	T									.		S	S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
	64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.																				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.

	137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Query Sequence	S	T	L	R	D	A	F	L	K	V	G	L	R	A	M	T	C	F	E	T	T	D	R	N	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	E	L	Q	E	G	V	E	E	N	I	R	F	A	R	L	I	D	E	A	K	K	A	T	S	E	P	Y	L	V	E	A	H	.	.	.	.	.
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Conservation
Template Sequence	R	D	A	I	N	S	G	K	L	A	G	P	R	I	F	A	A	G	K	T	I	A	T	T	G	G	H	A	D	P	T	N	G	K	A	V	D	D	Y	D	Y	P	V	P	E	Q	G	V	V	N	G	P	Y	E	V	Y	A	A	V	R	Q	R	Y	K	D	G	A	D	G	I	K	I	T	V	T	G	G	V	L	S
Template Known Secondary structure						T	T	S	S										S		B			T	T		T	T		T	T	T	T			G	G	G						G	G	G	T				S															T		S							B			S	S	S
Template Predicted Secondary structure
Template SS confidence
	124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.						.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure	.																																															.	.	.	.	.
Query SS confidence	.																																															.	.	.	.	.
Query Sequence	.	I	G	A	H	A	P	F	T	V	P	D	A	G	L	E	M	L	R	E	A	V	K	A	T	G	R	G	L	H	I	H	A	A	E	D	L	Y	D	V	S	Y	S	H	H	W	Y	.	.	.	.	.	G	K	D	L	L	A	R	L	A	Q	F	D	L	I	D	S	K	T	L	V	A	H	G	L	Y	L	S	K
Query Conservation	.																																															.	.	.	.	.
Alig confidence	.																																															.	.	.	.	.
Template Conservation
Template Sequence	V	A	K	S	G	Q	N	P	Q	F	T	Q	E	E	V	D	A	V	V	S	A	A	K	D	Y	G	X	W	V	A	V	H	A	H	G	A	E	G	X	K	R	A	I	K	A	G	V	D	S	I	E	H	G	T	F	X	D	L	E	A	X	D	L	X	I	E	N	G	T	Y	Y	V	P	T	I	S	A	G	E	F
Template Known Secondary structure	S	S	S		S	S		B		S															T	T									S											T		S						T	T													T
Template Predicted Secondary structure
Template SS confidence
	204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

	271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.				.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence	D	D	I	T	L	L	N	Q	R	D	A	F	L	V	H	N	A	R	S	N	M	N	N	H	.	.	.	V	G	Y	N	H	H	L	S	D	I	R	N	L	A	L	G	T	D	G	I	G	S	D	M	F	E	E	M	K	F	A	F	F	K	H	R	D	A	G	G	P	L	W	P	D	S	F	A	K	A	L	T	N
Query Conservation																									.	.	.
Alig confidence																									.	.	.																																				.	.
Template Conservation																																																															.	.
Template Sequence	V	A	E	K	S	K	I	D	N	F	F	P	E	I	V	R	P	K	A	A	S	V	G	P	Q	I	S	D	T	F	R	K	A	Y	E	K	G	V	K	I	A	F	G	T	D	A	G	V	Q	K	H	G	T	N	W	K	E	F	V	Y	X	V	.	.	E	N	G	X	P	A	X	K	A	I	Q	S	A	T	X	E
Template Known Secondary structure					T	T	S	T	T	S	S		T	T	T																						T			B						B	T	T	B		T	T		T	T								.	.		T	T										T	T
Template Predicted Secondary structure																																																															.	.
Template SS confidence
	284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.			.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

	348	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	N	E	L	M	S	R	N	F	G	A	K	F	G
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence	T	A	K	L	L	.	.	R	I	E	D	K	L	G
Template Known Secondary structure					T	.	.	T		T	T	T
Template Predicted Secondary structure						.	.
Template SS confidence
	362	.	.	.	.			.	.	.	370	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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