Job Description Q46812 Confidence 99.84% Date Thu Jan 5 12:34:40 GMT 2012 Rank 65 Aligned Residues 299 % Identity 13% Template c3msrA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidohydrolases; PDBTitle: the crystal structure of an amidohydrolase from mycoplasma synoviae Resolution 2.16 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		P	D	A	S	F	K	E	M	H	G	R	I	V	M	P	.	.	.	G	I	V	C	S	H	N	H	F	Y	S	G	L	S	R	G	I	M	A	N	I	A	P	C	P	D	F	I	S	T	L	K	N	L	W	W	R	L	D	R	A	L	D	E	E	S	L	Y	Y	S	G	L	I	C	S	L	E	A	I	K	S	G
Query Conservation																	.	.	.
Alig confidence													.				.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	N	K	F	A	R	T	V	L	G	D	.	I	P	V	E	K	L	G	I	T	D	C	H	D	H	F	I	K	N	G	G	P	E	V	E	E	H	I	D	F	L	X	L	N	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	I	K	E	F	K	E	F	I	D	R	G
Template Known Secondary structure									T	T			.			G	G	G										S		B		S	S							G	G	G		B					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T
Template Predicted Secondary structure													.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																					.	.	50	.	.	.	.	.	.	.	.	.	60
		119	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																																																												.	.	.	.	.	.	.	.	.
Query SS confidence													.																																																												.	.	.	.	.	.	.	.	.
Query Sequence		C	T	S	V	I	D	H	H	A	S	P	.	A	Y	I	G	G	S	L	S	T	L	R	D	A	F	L	K	V	G	L	R	A	M	T	C	F	E	T	T	D	R	N	N	G	I	K	E	L	Q	E	G	V	E	E	N	I	R	F	A	R	L	I	D	E	A	K	K	A	T	S	.	.	.	.	.	.	.	.	.
Query Conservation													.																																																												.	.	.	.	.	.	.	.	.
Alig confidence													.																																																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	T	I	V	T	X	D	P	P	N	V	G	R	D	V	L	K	T	L	E	I	A	N	A	V	K	N	L	G	G	N	V	I	X	S	T	G	F	H	K	A	K	F	Y	D	K	Y	S	S	W	L	A	V	V	P	T	E	E	I	V	K	X	C	V	A	E	I	E	E	G	X	D	E	Y	N	Y	N	G	P
Template Known Secondary structure											T	T	T	T														G	G	G	T												G	G	G	S		T	T	T	S					S															T			B	T	T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
									189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	E	P	Y	L	V	E	A	H	I	G	A	H	A	P	F	T	V	P	D	A	G	L	E	M	L	R	E	A	V	K	A	T	G	R	G	L	H	I	H	A	A	E	D	L	Y	D	V	S	Y	S	H	H	W	Y	G	K	D	L	L	A	R	L	A	Q	F	D	L	I	D	S	K	T	L
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.
Template Sequence		V	V	K	R	S	K	A	K	A	G	I	I	K	A	G	T	G	Y	G	A	I	D	R	L	E	L	K	A	L	E	V	A	A	R	T	S	I	L	T	G	C	P	I	L	V	H	T	Q	L	G	T	X	A	L	E	V	.	.	.	.	.	.	.	.	.	A	K	H	L	I	G	F	G	A	N	P	D	K	I	Q
Template Known Secondary structure					B		S											B	T	T	B																												G	G	G		S					.	.	.	.	.	.	.	.	.								T			G	G	G
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.										.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		262	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.							.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																								.	.	.	.	.	.																		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.																								.	.	.	.	.	.																		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	H	G	.	.	L	Y	L	S	K	D	D	I	T	L	L	N	Q	R	D	A	F	L	V	H	N	A	R	.	.	.	.	.	.	S	N	M	N	N	H	V	G	Y	N	H	H	L	S	D	I	R	.	.	N	L	A	L	G	T	D	G	I	G	S	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation						.	.																								.	.	.	.	.	.																		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																								.	.	.	.	.	.																		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	H	L	N	K	N	P	D	K	Y	Y	Y	E	K	V	I	K	E	T	G	V	T	L	C	F	D	G	P	D	R	V	K	Y	Y	P	D	S	L	L	A	E	N	I	K	Y	L	V	D	K	G	L	Q	K	H	I	T	L	S	L	D	A	G	R	I	L	Y	Q	R	N	Y	G	L	T	K	G	K	Q	T	F
Template Known Secondary structure					G	G	G	S																						T	T		T	T	T																T	T		G	G	G									S	G	G	G	S							T	T
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
			319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	F	E	E	M	K	F	A	F	F	K	H	R	D	A	G	G	P	L	W	P	D	S	F	A	K	A	L	T	N	G	N	E	L	M	S	R	N	F	G	A	K	F	G	L	L	E	A	G	Y	K	A	D	L	T	I
Query Conservation		.
Alig confidence		.																																					.	.	.
Template Conservation																																							.	.	.
Template Sequence		G	L	A	Y	L	F	D	R	F	L	P	L	L	K	Q	V	G	V	S	K	E	A	I	F	D	I	L	V	N	N	P	K	R	V	L	A	F	.	.	.	D	E	K	R	N	F	D	P	L	K	V	S	K	E	V	L
Template Known Secondary structure			T						T									T											T							T	S		.	.	.								G	G	G	S
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.				.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions