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Job DescriptionQ46812
Confidence100.00%DateThu Jan 5 12:34:40 GMT 2012
Rank1Aligned Residues420
% Identity21%Templatec3lnpA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:amidohydrolase family protein olei01672_1_465; PDBTitle: crystal structure of amidohydrolase family protein2 olei01672_1_465 from oleispira antarctica
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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Query Sequence  LILKNVTAVQLHPA. . KVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAP
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Template Sequence  LRINSHWIIPIENTVSNILIDHCLLIKDGIILAIEPQSSCQIPATETLDLGQQVLXPGWVNAHGHAAXSLFRGLADDLPL
Template Known Secondary structure 

SS



S
TTTTT





S

S

GGGGGGTTSS
S

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Query Sequence  CPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDR
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Template Sequence  XTWLQEHVWPAEAQHV. . . DEHFVKQGTELAIAEXIQSGTTTFADXYFYPQQSGEAALA. . . . . . . AGIRAVCFAPVLDF
Template Known Secondary structure  T
...STT

S
.......T

SS
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Query Sequence  NNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSH
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Template Sequence  PTNYAQNADEYIRKAIEC. NDRFNNHPXNEQGLVQIGFGPHAPYTVSDEPLKEITXLSDQLDXPVQIHLHETDFEVSESL
Template Known Secondary structure 

SS
SS.S
GGGTT



TTTS
T

S
S
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   177..180.........190.... .....200.........210.........220.........230.........240.........250.....
 
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Query Sequence  HWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNH. . . VGYNHHLSDIRNLALGTDGIGS
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Template Sequence  ETFNKRPTQRLADIGFLNERVSCVHXTQVDDGDIKILQKTGASIIHCPESNLKLASGFCPIAKLSAANIPLAIGTDGAAS
Template Known Secondary structure  SS
TT

STT

S




TT




TT





TTS
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Query Sequence  D. . . . . . . . MFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIA
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Template Sequence  NNDLDXFSETKTAALLAKGVSQDASAIPAIEALTXATLGGARAL. . GIDDITGSLKPGKAADIQAIDLNTLSSQPVFDPV
Template Known Secondary structure  S



T
TTSS
TT..T
TTTSSS

TTSB



SGGG
S
S
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   336...340.........350.........360.........370......... 380.........390.........400.........410...
 
   389390.........400.........410...... ...420.........430....
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Query Sequence  GHIAFGMGSGSVHSVMVNGVMVYEDRQF. NFDCDSIYAQARKAAASM
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Template Sequence  SHXVYCTKSTQVSHVWVNGRCLLKNGELTTLNEETLINHAKAWASAI
Template Known Secondary structure  S

GGGTTTTSSS
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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