Job Description Q46812 Confidence 99.40% Date Thu Jan 5 12:34:40 GMT 2012 Rank 101 Aligned Residues 296 % Identity 8% Template c3jzeC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:dihydroorotase; PDBTitle: 1.8 angstrom resolution crystal structure of dihydroorotase (pyrc)2 from salmonella enterica subsp. enterica serovar typhimurium str. lt2 Resolution 1.80 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		H	G	R	I	V	M	P	G	I	V	C	S	H	N	H	F	Y	S	G	L	S	R	G	I	M	A	N	I	A	P	C	P	D	F	I	S	T	L	K	N	L	W	W	R	L	D	R	A	L	D	E	E	S	L	Y	Y	S	G	L	I	C	S	L	E	A	I	K	S	.	G	C	T	S	V	I	D	H	H	A	S
Query Conservation																																																																						.
Alig confidence																				.	.	.	.	.	.																																													.
Template Conservation																				.	.	.	.	.	.
Template Sequence		S	Q	V	L	K	I	R	R	P	D	D	W	H	V	H	L	R	D	.	.	.	.	.	.	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	S	P	I	T	T	V	D	A	A	I	A	Y	R	Q	R	I	L	D	A	V	P	A	G	H	D	F	T	P	L	M	T
Template Known Secondary structure																			S	.	.	.	.	.	.													T	T		S								S	S	S				S															S		T	T
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.							.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		P	A	Y	I	G	G	S	L	S	T	L	R	D	A	F	L	K	V	G	L	R	A	M	T	C	F	E	T	T	D	R	N	.	.	N	G	I	K	E	L	Q	E	G	V	E	E	N	I	R	F	A	R	L	I	D	E	A	K	K	A	T	S	E	P	Y	L	V	E	A	H	I	G	A	H	A	P	F	T	V	P
Query Conservation																																		.	.
Alig confidence																																		.	.																																												.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		C	Y	L	T	D	S	L	D	A	D	E	L	E	R	G	F	H	E	G	V	F	T	A	A	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	V	D	A	I	M	P	V	L	E	R	M	E	K	L	G	I	P	L	L	V	H	G	E	V	T	H	A	D	V	D	I	F	D	R	E	A	R	.	.	.
Template Known Secondary structure						T	T												T	T	S							B	T	T	S	S	T	T		T	T	S	B	S		T	T	T	T											T												T	T	S		G	G	G					.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	G	L	E	M	L	R	E	A	V	K	A	T	G	R	G	L	H	I	H	A	A	E	D	L	Y	D	V	S	Y	S	H	H	W	Y	G	K	D	L	L	A	R	L	A	Q	F	D	L	I	D	S	K	T	L	V	A	H	G	L	Y	L	S	K	D	D	I	T	L	L	N	Q	R	D	A	F	L	V	H	N
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	I	D	T	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	T	T	K	D	A	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	Y	V	R	D	G	N	D	Y	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	D	M	L	V	G	G	I	R	P	H	L	Y	C	L	P
Template Known Secondary structure						T								S	T	T							S			S				.	.	.	.	.	.	.	.	.	.	.	.							S		T	T																			T	T	S			G	G	G			S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.													.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.														.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																								.										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	S	N	M	N	N	H	V	G	Y	N	H	H	L	S	D	I	R	N	L	A	.	L	G	T	D	G	I	G	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	M	F	E	E	M	K	F	A	F	F	K	H	R	D	A	G	G	P	L	W	P	D	S	F	A	K	A	L	T	N	G	N	E	L	M
Query Conservation																								.										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	K	R	N	I	H	Q	Q	A	L	R	E	L	V	A	S	G	F	T	R	A	F	L	G	T	D	S	A	P	H	S	R	H	R	K	E	T	S	C	G	C	A	G	C	F	N	A	P	S	A	L	G	S	Y	A	A	V	F	E	E	M	N	A	L	A	H	F	E	A	F	C	S	L	N	G	P	Q	F	Y
Template Known Secondary structure																		T	T		T	T							B				B					S	S	S	S								T	T	T												T	T		G	G	G							T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	N	F	G	A	K	F	G	L	L	E	A	G	Y	K
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	G	L	P	M	N	T	G	W	V	E	L	V	R	D
Template Known Secondary structure		.	.	T
Template Predicted Secondary structure		.	.
Template SS confidence
				305	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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