Job Description Q46812 Confidence 95.45% Date Thu Jan 5 12:34:40 GMT 2012 Rank 148 Aligned Residues 271 % Identity 12% Template c3irsB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein bb4693; PDBTitle: crystal structure of uncharacterized tim-barrel protein bb4693 from2 bordetella bronchiseptica Resolution 1.76 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	C	S	H	N	H	F	Y	S	G	L	S	R	G	I	M	A	N	I	A	P	C	P	D	F	I	S	T	L	K	N	L	W	W	R	L	D	R	A	L	D	E	E	S	L	Y	Y	S	G	L	I	C	S	L	E	A	I	K	S	G	C	T	S	V	I	D	H	H	A	S	P	A	Y	I	G	G	S	L	S
Query Conservation
Alig confidence																																				.	.	.	.	.
Template Conservation																																				.	.	.	.	.
Template Sequence		I	I	D	F	R	L	R	P	P	A	M	G	F	L	N	A	R	I	Y	T	R	P	D	I	R	N	R	F	T	R	Q	L	G	F	.	.	.	.	.	E	P	A	P	S	A	E	E	K	S	L	E	L	M	F	E	E	M	A	A	A	G	I	E	Q	G	V	C	V	G	R	N	S	S	V	L	G	S	V	S	N
Template Known Secondary structure					S	S	B			S	S	T	T	G	G	G	S																	T		.	.	.	.	.								T	T													T												T	T	T
Template Predicted Secondary structure																																				.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	R	D	A	F	L	K	V	G	L	R	A	M	T	C	F	E	T	T	D	R	N	N	G	I	K	E	L	Q	E	G	V	E	E	N	I	R	F	A	R	L	I	D	E	A	K	K	A	T	S	E	P	Y	L	V	E	A	H	I	G	A	H	A	P	F	T	V	P	D	A	G	L	E	M	L	R	E	A	V
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.																																	.
Template Sequence		A	D	V	A	A	V	A	K	A	Y	P	D	K	F	H	P	V	G	S	I	E	A	A	.	.	.	.	.	.	.	.	.	.	.	T	R	K	E	A	M	A	Q	M	Q	E	I	L	D	L	G	I	R	I	V	N	L	E	P	G	V	W	A	T	P	M	H	.	V	D	D	R	R	L	Y	P	L	Y	A	F	C
Template Known Secondary structure											S	T	T	T										S	.	.	.	.	.	.	.	.	.	.	.	S														T	T								G	G	G	S	S	S				.	T	T		G	G	G
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.																																	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100												.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	T	G	R	G	L	H	I	H	A	A	E	D	L	Y	D	V	S	Y	S	H	H	W	Y	G	K	D	L	L	A	R	L	A	Q	F	D	L	I	D	S	K	T	L	V	A	H	G	L	Y	L	S	K	D	D	I	T	L	L	N	Q	R	D	A	F	L	V	H	N	A	R	S	N	M	N	N	H	V	G	Y
Query Conservation
Alig confidence																			.	.																		.	.
Template Conservation																			.	.																		.	.
Template Sequence		E	D	N	G	I	P	V	I	M	M	T	G	G	N	A	G	P	.	.	D	I	T	Y	T	N	P	E	H	I	D	R	V	L	G	D	F	.	.	P	D	L	T	V	V	S	S	H	G	N	W	P	W	V	Q	E	I	I	H	V	A	F	R	R	P	N	L	Y	L	S	P	D	M	Y	L	Y	N	L	P	G	H
Template Known Secondary structure				T	T								S	S	S		S	S	.	.	S	G	G	G	G													.	.	T	T							G	G	G	T	T													T	T						G	G	G	G	S	S	S	T	T
Template Predicted Secondary structure																			.	.																		.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		298	.	300	.	.	.						.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure								.	.	.	.	.
Query SS confidence								.	.	.	.	.
Query Sequence		N	H	H	L	S	D	.	.	.	.	.	I	R	N	L	A	L	G	T	D	G	I	G	S	D	M	F	E	E	M	K	F	A	F	F	K	H	R	D	A	G	G	P	L	W	P	D	S	F	A	K	A	L	T	N	G	N	E	L	M	S	R
Query Conservation								.	.	.	.	.
Alig confidence								.	.	.	.	.																										.	.	.	.	.
Template Conservation																																						.	.	.	.	.
Template Sequence		A	D	F	I	Q	A	A	N	S	F	L	A	D	R	M	L	F	G	T	A	Y	P	M	C	P	L	K	E	Y	T	E	W	F	L	T	L	.	.	.	.	.	P	I	K	P	D	A	M	E	K	I	L	H	G	N	A	E	R	L	L	A	Q
Template Known Secondary structure									T	T	T	T	T	T	T	B						B	T	S	S											T	S	.	.	.	.	.												T
Template Predicted Secondary structure																																						.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.						.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions