Return to main results Retrieve Phyre Job Id

Job DescriptionQ46812
Confidence100.00%DateThu Jan 5 12:34:40 GMT 2012
Rank22Aligned Residues397
% Identity15%Templatec3hm7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:allantoinase; PDBTitle: crystal structure of allantoinase from bacillus halodurans c-125
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  LILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPCP
Query Conservation 





 

      
     
 
  
 
  

           


  
  
 




 
 
                 
Alig confidence 












...































































Template Conservation   

 
  
     ...     
 
 

 
  

           


  
  
 




 
 

                
Template Sequence  LIIRSSTVVTETT. . . TYRADVAIRNGIVSAITEPGSISSDDGPAIDGTGLHLFPGMVDVHVHFNEPGRTEWEGFASGSK
Template Known Secondary structure 
SS
...TTSTT
S
TTSS

TT




TTTSGGG

S
Template Predicted Secondary structure 





...

































Template SS confidence 















































































   6...10........ .20.........30.........40.........50.........60.........70.........80..
 
   82.......90......... 100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 







.























Query SS confidence 

















.




























































Query Sequence  DFISTLKNLWWRLDRALD. EESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRN
Query Conservation                    .                  
 
                                        
Alig confidence 

















.




























































Template Conservation       
                                                        
                 
Template Sequence  SLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPGNIDHLQDLHDGGVIGFKAFMSECGTDDFQ
Template Known Secondary structure  TTT
SSSSSS
S
ST
SS

TT
GGGTT
SSSS
SSSSS
Template Predicted Secondary structure 








































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   161........170..... ....180.........190.........200.........210.........220........
Predicted Secondary structure 


............



















Query SS confidence 














. . . . . . . . . . . .




















































Query Sequence  NGIKELQEGVEENIR. . . . . . . . . . . . FARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHA
Query Conservation                 ............                                         
         
 
Alig confidence 














............




















































Template Conservation                                                                      
           
Template Sequence  FSHDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTCCPIHICH
Template Known Secondary structure 


T




TT

SS
T



Template Predicted Secondary structure 

























Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   229230.........240.........250.........260.........270.........280.........290.........300........
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  AEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLA
Query Conservation                                                            
                
    
Alig confidence 








.........





























..





























Template Conservation           .........                              ..                         
    
Template Sequence  VSSRKVLKR. . . . . . . . . IKQAKGEGVNVSVETCPHYLLFSLDEFAEI. . GYLAKCAPPLRERQEVEDLWDGLMAGEIDL
Template Known Secondary structure 


.........TT




..
STT

SS



T


Template Predicted Secondary structure 


.........








..













Template SS confidence 















































































   243......250. ........260.........270.........280. ........290.........300.........310.
 
   309310........ .320.........330.........340.........350.........360.........370
Predicted Secondary structure 






..................

















Query SS confidence 









. . . . . . . . . . . . . . . . . .



















































Query Sequence  LGTDGIGSDM. . . . . . . . . . . . . . . . . . FEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKAD
Query Conservation   


      ..................               
     

   
   
           
 
  
  

Alig confidence 









..................

































..















Template Conservation    

                                        

  


   
   
  
..

    
 
  

 

Template Sequence  ISSDHSPSLPQMKTGKTIFEVWGGIAGCQNTLAVMLTEGYHKRKMPLTQIVQLLSTEPAKRF. . GLYPQKGTIQVGAEAS
Template Known Secondary structure 


B



GGGG

SSTTTS


B

TTTTTTTT


T..T
TTTSS

STTSB

Template Predicted Secondary structure 



















..











Template SS confidence 















































































   312.......320.........330.........340.........350.........360.........370... ......380.........
 
   371........380.........390......... 400.........410....
Predicted Secondary structure 


















.....




Query SS confidence 




























. . . . .














Query Sequence  LTICDYNSPTPLLADNIAGHIAFGMGSGS. . . . . VHSVMVNGVMVYEDR
Query Conservation 


 
 
                      .....
  


 
  
  

Alig confidence 




























.....














Template Conservation 


 
                             
  


 
 


   
Template Sequence  FTLIDLNESYTLNASDLYYRHPISPYVGQRFRGKVKHTICQGKHVYQDH
Template Known Secondary structure 

GGG

SSS


TTTT
TT

Template Predicted Secondary structure 






















Template SS confidence 
















































   390.........400.........410.........420.........430........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions