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Job DescriptionQ46812
Confidence97.45%DateThu Jan 5 12:34:40 GMT 2012
Rank143Aligned Residues222
% Identity14%Templatec3guwB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized protein af_1765; PDBTitle: crystal structure of the tatd-like protein (af1765) from2 archaeoglobus fulgidus, northeast structural genomics3 consortium target gr121
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80.........90......... 100.........110.........120......
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Query Sequence  IVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALD. . . . . . . . . . . EESLYYSGLICSLEAIKSGCTSVIDHH
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Template Sequence  YFDSHLHS. . . . . . . . . . EGLGFSELVKLKENGIKEVCSLAFFPVKPKYPQTXIDVFRKLTEFEPLRCEAAGVKXHPAVG
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G..........GG

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B


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B

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   2....... 10.........20.........30.........40.........50.........60.........70.
 
   127..130.........140.........150.........160.........170.........180.........190.........200......
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Query Sequence  ASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVP
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Template Sequence  IHPRCIPPDYEFVLGYLEEGEWVAFGEIGLEL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VTDEE
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GGG

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S

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   72.......80.........90.........100... .....
 
   207..210.........220.........230.........240.........250.........260.........270.........280......
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Query Sequence  DAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHN
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Template Sequence  IEVLKSQLELAKRXDVPCIIHTPRGNKLKATRKT. . . . . . LEILESLDFPADLAVIDHV. . . NFETLDXVLETEYWIGLT
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SSSTT......TT

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   109110.........120.........130.........140.. .......150.........160. ........170.........
 
   287..290.........300.........310.........320.........330.........340.........350....
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Query Sequence  ARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSR
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Template Sequence  VQDAARIVAEH. . . . . . GERFXLNSDAGYRVAEAAVKIEE. . . . . . . AVGREEXEKVARENARKFLRV
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TTGGGG
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TT.......
TTGGGGSSTT
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   180.........190 .........200.........210... ......220.........230....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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