Return to main results Retrieve Phyre Job Id

Job DescriptionQ46812
Confidence99.37%DateThu Jan 5 12:34:40 GMT 2012
Rank102Aligned Residues271
% Identity14%Templatec3f4cA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:organophosphorus hydrolase; PDBTitle: crystal structure of organophosphorus hydrolase from geobacillus2 stearothermophilus strain 10, with glycerol bound
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.. ...60.........70.........80.........90.........100.........110.........120.........130
Predicted Secondary structure 
...








































Query SS confidence 


. . .









































































Query Sequence  VMP. . . GIVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPA
Query Conservation 
 
...



 
 
                                                     
 
          
Alig confidence 


...






















.................




























..


Template Conservation        
  
 
 

              .................          
   
     



 

  ..   
Template Sequence  VPVEQLGKTLIHEHFLFGYPGFQGDVTRG. . . . . . . . . . . . . . . . . TFREDEALRVAVEAAEKMKRHGIQTVVDP. . TPN
Template Known Secondary structure  GGG

SS



TTGGGG
TTS.................


TTT


..

G
Template Predicted Secondary structure 























.................







..


Template SS confidence 















































































   110.........120.........130........ .140.........150.........160....... ..170
 
   131........140.........150.........160.........170.........180.........190...... ...200..
Predicted Secondary structure 






















........




Query SS confidence 

































































. . . . . . . .





Query Sequence  YIGGSLSTLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAH. . . . . . . . IGAHAP
Query Conservation                                                                    ........      
Alig confidence 

































































........





Template Conservation                     
    
                        
          
   

              
Template Sequence  DCGRNPAFLRRVAEETGLNIICATGYYYEGEGAPPYFQFRRLLGTAEDDIYDMFMAELTEGIADTGIKAGVILASSKGRI
Template Known Secondary structure  GGT



B




TTSS
TT
T
STTS



SB

B
BTTB
Template Predicted Secondary structure 








































Template SS confidence 















































































   171........180.........190.........200.........210.........220.........230.........240.........250
 
   203......210.........220.........230.........240.........250.........260....... ..270.........280.
Predicted Secondary structure 


























.




Query SS confidence 
































































.













Query Sequence  FTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLY. LSKDDITLLNQRDA
Query Conservation                
         
                                        .              
Alig confidence 


































.........




















.













Template Conservation                
   
  
 

          .........       
       
 
                
 
Template Sequence  TEYEKMFFRAAARAQKETGAVIITHTQEGTMGPEQ. . . . . . . . . AAYLLEHGADPKKIVIGHMCGNTDPDYHRKTLAYGV
Template Known Secondary structure 


BB
STT

.........TT

GGG

GGG


TTT
Template Predicted Secondary structure 









.........
















Template SS confidence 















































































   252.......260.........270.........280...... ...290.........300.........310.........320..
 
   282.......290 .........300..... ....310... ......320.........330..
Predicted Secondary structure 

.........





..


..................



Query SS confidence 








. . . . . . . . .














. .







. . . . . . . . . . . . . . . . . .


















Query Sequence  FLVHNARSN. . . . . . . . . MNNHVGYNHHLSDIR. . NLALGTDG. . . . . . . . . . . . . . . . . . IGSDMFEEMKFAFFKHRDA
Query Conservation       
   .........             
 ..    


 ..................                   
Alig confidence 








.........














..







..................


















Template Conservation   
                                



  

                                   
  
Template Sequence  YIAFDRFGIQGMVGAPTDEERVRTLLALLRDGYEKQIMLSHDTVNVWLGRPFTLPEPFAEMMKNWHVEHLFVNIIPALKN
Template Known Secondary structure 

TT

SSSS


TT
GGG




SS




TTT
STTTT
Template Predicted Secondary structure 










































Template SS confidence 















































































   323......330.........340.........350.........360.........370.........380.........390.........400..
 
   333......340.........350..
Predicted Secondary structure 



Query SS confidence 



















Query Sequence  GGPLWPDSFAKALTNGNELM
Query Conservation   
     

   
   
   
Alig confidence 



















Template Conservation   
   
 
      
 


 
Template Sequence  EGIRDEVLEQMFIGNPAALF
Template Known Secondary structure  TT

T
Template Predicted Secondary structure 



Template SS confidence 



















   403......410.........420..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions