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Job DescriptionQ46812
Confidence100.00%DateThu Jan 5 12:34:40 GMT 2012
Rank47Aligned Residues344
% Identity17%Templatec3etkA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:uncharacterized metal-dependent hydrolase; PDBTitle: crystal structure of an uncharacterized metal-dependent2 hydrolase from pyrococcus furiosus
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40 .........50.........60.........70......
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Query Sequence  MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQR. . . . YPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMAN
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Template Sequence  MKALINGTIYTSFSPVKKV. SGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVD
Template Known Secondary structure 
SSTT.STT
T

TT


TS
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   35....40.........50... ......60.........70.........80.........90.........100.........110...
 
   77..80.........
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Query Sequence  IAPCPDFISTLKN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LRGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMNSKMIDLLNLKPSKDFDEST
Template Known Secondary structure 
TT

ST

SSS
TS


TTSSS
TTSS





TTTTT
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   114.....120.........130.........140.........150.........160.........170.........180.........190...
 
   90.........100.........110.........120.........130.........140.........150........
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Query Sequence  . . . . . . . . . . . LWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTD
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Template Sequence  GIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSVGEKALKALFELEREGRLKMNVFAYLSPELL.
Template Known Secondary structure  TTTS
TT
TT


S
GGG.
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   194.....200.........210.........220.........230.........240.........250.........260.........270..
 
   159160.........170.........180.........190..... ....200.........210....
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Query Sequence  RNNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEA. . . . . . . . . . . . . . . . . . . . . . . . HIGAHAPFTVPDAGLEMLR
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Template Sequence  . . . . . . . . . . . . . . . . . . . DKLEELNLGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIVEVI
Template Known Secondary structure  ...................T

S
SSS


TTTT
S

SS
BTTBTT




SS
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   273......280.........290.........300.........310.........320.........330...
 
   215....220.........230.........240.........250.........260.........270.........280.........290..
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Query Sequence  EAVKATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMN. .
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Template Sequence  ERAKPLGLDVAVHAIGDKA. . . . . . . . . . . . VDVALDAFEEAEFSGRIEHASLVRDDQLERIKELKVRISAQPHFIVSDW
Template Known Secondary structure  GGGT

S............TT




B

T

T
T
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   334.....340.........350.. .......360.........370.........380.........390.........400.
 
   293......300.........310.........320.........330. ........340.........350.......
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Query Sequence  . . . . . . . . . . . NHVGYNHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRD. . . . AGGPLWPDSFAKALTNGNELMSRNFG
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Template Sequence  WIVNRVGEERAKWAYRLKTLSSITKLGFSTDSPIEPADPWVSIDAAVNRYVVDPGERVSREEALHLYTHGSAQVTLA. . .
Template Known Secondary structure  TGGGB

S


TTTTS




SS
GGG


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   402.......410.........420.........430.........440.........450.........460.........470........
 
   358.360.........370.........380
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Query Sequence  AKFGLLEAGYKADLTICDYNSPT
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Template Sequence  EDLGKLERGFRAEYIILDRDPLK
Template Known Secondary structure  TT
S

STTSB

SS
TT
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   479480.........490.........500.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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