Return to main results Retrieve Phyre Job Id

Job DescriptionQ46812
Confidence100.00%DateThu Jan 5 12:34:40 GMT 2012
Rank32Aligned Residues353
% Identity17%Templatec3be7B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:zn-dependent arginine carboxypeptidase; PDBTitle: crystal structure of zn-dependent arginine carboxypeptidase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  LILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPCP
Query Conservation 





 

      
     
 
  
 
  

           


  
  
 




 
 
                 
Alig confidence 















.




















...

































.....
Template Conservation 


 
  
 
      .    
 
 

 
  

     ...   


  
  
 

 

 
 
            .....
Template Sequence  FLIKSKGYLDIQTGEI. IKADLLIRNGKIAEIGKINTK. . . DATVISIPDLILIPGLMDSHVHIVGNDSKGEESI. . . . .
Template Known Secondary structure 
S
TTT

.

TTS



...SS

TT



SS



SGGGT.....
Template Predicted Secondary structure 






.









...
























.....
Template SS confidence 















































































   6...10.........20. ........30.........40.. .......50.........60.........70......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  DFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNN
Query Conservation                                      
 
                                         
Alig confidence  ...............



































.



























Template Conservation  ...............                  
  
 
            .                            
Template Sequence  . . . . . . . . . . . . . . . ADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANYAD. VSVRDAIERGVINGPTMLVSGPALGITG
Template Known Secondary structure  ...............T

TTTT


STT.TTSS





S
BB
TT
Template Predicted Secondary structure  ...............













.














Template SS confidence 















































































   77..80.........90.........100.........110.. .......120.........130.........140
 
   162... ....170.........180.........190.........200.........210.........220....
Predicted Secondary structure 

.................


















Query SS confidence 



. . . . . . . . . . . . . . . . .


























































Query Sequence  GIKE. . . . . . . . . . . . . . . . . LQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGL
Query Conservation      .................                                                   
       
Alig confidence 



.................


























































Template Conservation                                                                                  
Template Sequence  GHCDHNLLPPEFNYSSEGVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKV
Template Known Secondary structure  STTS


S
TTT



TTB

ST
S
B

SSSSS

TTSB
S
TT
Template Predicted Secondary structure 












































Template SS confidence 















































































   141........150.........160.........170.........180.........190.........200.........210.........220
 
   225....230.........240.........250.........260.........270.........280.........290...
Predicted Secondary structure 

























...........
Query SS confidence 




































































. . . . . . . . . . .
Query Sequence  HIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNN. . . . . . . . . . .
Query Conservation    
                                                           
      ...........
Alig confidence 
















.................


































...........
Template Conservation                  
.................                                              
Template Sequence  AAHAHGLIGIKAAIKAG. . . . . . . . . . . . . . . . . VDSVEHASFIDDETIDMAIKNNTVLSMDIFVSDYILGEGAKAGIRE
Template Known Secondary structure 
ST.................
S
TT

T



STTTT

Template Predicted Secondary structure 






.................




























Template SS confidence 















































































   221........230....... ..240.........250.........260.........270.........280...
 
   294.....300.........310.........320.........330.........340.........350.........360
Predicted Secondary structure  .............























Query SS confidence  . . . . . . . . . . . . .


































































Query Sequence  . . . . . . . . . . . . . HVGYNHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKF
Query Conservation  .............          
     


                     
     

   
   
           
Alig confidence  .............



































..






















...


Template Conservation                         
      

                 ..  

   


   
   
  


...   
Template Sequence  ESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGIFDHGDNAKQFAYMV. . EWGMTPLEAIQASTIKTATLFGI. . . ENI
Template Known Secondary structure  T





BTTB
TTGGGG..TT

TTTT
...
S
Template Predicted Secondary structure 

























..






...


Template SS confidence 















































































   284.....290.........300.........310.........320.........330.. .......340.........350..... ...
 
   361........370.........380.........390.........400.........410...
Predicted Secondary structure 





























Query SS confidence 




















































Query Sequence  GLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYED
Query Conservation 
 
  
  




 
 
                      
  


 
  
  
Alig confidence 





















............


















Template Conservation 
 
  
  




 
 

    ............     
  
 
 
 

 

Template Sequence  GQIKEGFDADIVGVIENPLANI. . . . . . . . . . . . RTLEEVAFVMKEGKVYKRR
Template Known Secondary structure  SS

TTSB

SS
TTT
G............GGTTS

TT

Template Predicted Secondary structure 











............








Template SS confidence 




















































   359360.........370.........380 .........390.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions