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Job DescriptionQ46812
Confidence98.32%DateThu Jan 5 12:34:40 GMT 2012
Rank133Aligned Residues241
% Identity11%Templatec2y1hA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative deoxyribonuclease tatdn3; PDBTitle: crystal structure of the human tatd-domain protein 3 (tatdn3)
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70.........80.........90.........100.........110.........120.........130......
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Query Sequence  GIVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSL
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Template Sequence  GLVDCHCHLSAPDFDRDLD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DVLEKAKKANVVALVAVAEHSGEFEKIM
Template Known Secondary structure 

TTSGGGTTT.................................TT

SSGGG
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   7..10.........20..... ....30.........40.........50...
 
   137..140.........150.........160.........170.........180.........190.........200....... ..210.
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Query Sequence  STLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPD. . . . . AGLE
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Template Sequence  QLSERYNGFVLPCLGVHPVQRSV. . . . . . . . . TLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTGEQKEEQRQVLI
Template Known Secondary structure  TTTT


SB

B
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GGG
S



TTT

S
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   54.....60.........70...... ...80.........90.........100.........110.........120....
 
   212.......220.........230.........240.........250.........260.........270.........280.........290.
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Query Sequence  MLREAVKATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNM
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Template Sequence  RQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEK. . . . . . . . . . . . . . VLLHAFDGRPSVAMEGVRAGYFFSIPPSII.
Template Known Secondary structure  T


TT
TT

S..............T

S
TT

GGGG.
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   132.......140.........150.........160...... ...170.........180.........190......
 
   292.......300.... .....310.... .....320.........330.........340.........350....
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Query Sequence  NNHVGYNHHLSDI. RNLALGTDGI. . . . . . . GSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSR
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Template Sequence  RSGQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAEYIAQVKGISVEEVIEVTTQNALKLFPK
Template Known Secondary structure  T
S
GGG


TTSS
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GGGTS
STT
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   197..200.........210.........220.........230.........240.........250.........260.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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