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Job DescriptionQ46812
Confidence97.90%DateThu Jan 5 12:34:40 GMT 2012
Rank140Aligned Residues253
% Identity12%Templatec2xioA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative deoxyribonuclease tatdn1; PDBTitle: structure of putative deoxyribonuclease tatdn1 isoform a
Resolution1.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80.........90.........100.........110.........120.........130.......
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Query Sequence  IVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLS
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Template Sequence  FIDIGINLTDPMFRGIYRGVQKHQDDLQ. . . . . . . . . . . . . . . . . . . . . . . DVIGRAVEIGVKKFMITGGNLQDSKDALH
Template Known Secondary structure 
TT
GGGGTTT
S


.......................T


S
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   6...10.........20.........30... ......40.........50.........60..
 
   138.140.........150.........160.........170.........180.........190........ .200.........210.....
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Query Sequence  TLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIG. . AHAPFTVPDAGLEMLRE
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Template Sequence  LAQTNG. . . . . MFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFE
Template Known Secondary structure  TT
T.....T


GGGT
T
TTTTT
TTTS
T
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   63..... .70.........80.........90.........100.........110.........120.........130.......
 
   216...220.........230.........240.........250.........260.........270.........280.........290.....
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Query Sequence  AVKATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHV
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Template Sequence  LSEQTKLPMFLHCRNSHAEFLDITKRNRDRC. . . . . . . . . . . . VGGVVHSFDGTKEAAAALIDLDLYIGFNGCSLKTEA.
Template Known Secondary structure 


S
TGGGS............S
TT



TT

GGGSSS.
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   138.140.........150.........160........ .170.........180.........190.........200....
 
   296...300..... ....310.... .....320.........330.........340..
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Query Sequence  GYNHHLSDIR. . NLALGTDGI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GSDMFEEMKFAFFKHRDAGGPLWPDSFA
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Template Sequence  . NLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQILEIMSAVRDEDPLELAN
Template Known Secondary structure  .TS
GGG


TTS



TTSTTGGG





SS

TTSTT


GGGT

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   205....210.........220.........230.........240.........250.........260.........270.........280...
 
   343......350..
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Query Sequence  KALTNGNELM
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Template Sequence  TLYNNTIKVF
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   284.....290...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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