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Job DescriptionQ46812
Confidence100.00%DateThu Jan 5 12:34:40 GMT 2012
Rank45Aligned Residues356
% Identity13%Templatec2vhlB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:n-acetylglucosamine-6-phosphate deacetylase; PDBTitle: the three-dimensional structure of the n-acetylglucosamine-2 6-phosphate deacetylase from bacillus subtilis
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  LILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPCP
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Template Sequence  LLIKDIAIVTENE. . VIKNGYVGINDGKISTVSTERPKEPYSKEIQAPADSVLLPGMIDIHIHGGYGADTMDASF. . . . .
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   5....10....... ..20.........30.........40.........50.........60.........70.......
 
   82.......90.........100.........110.........120.........130.........140.. .......150....
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Query Sequence  DFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDA. . . . . . . FLKVGLRAMTCF
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . STLDIMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAELLGIH
Template Known Secondary structure  .......................GGGGT

S

TTSGGGSSS
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   78.80.........90.........100.........110.........120.........130....
 
   155....160.........170.........180.........190.........200.........210.........220.........230....
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Query Sequence  ETTDRNNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYD
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Template Sequence  LEGPFVSPKRAGAQPKEWIRPSDVELFKKWQQEAGGLIKIVTLAPE. . . . . . EDQHFELIRHLKDESIIASMGHTDADSA
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GGG
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GG......GSGGGTT

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   135....140.........150.........160.........170.........180 .........190.........200........
 
   235....240... ......250.........260.........270.........280.........290.......
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Query Sequence  VSYSHHWYG. . . . . . . . . . . . . . . . . KDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGY
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Template Sequence  LLSDAAKAGASHMTHLYNAMSPFHHREPGVIGTALAHDGFVTELIADGIHSHPLAAKLAFLAKGSSKLILITDSMRAKGL
Template Known Secondary structure  TTSSTTTTB



SSS

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   298.300.........310.........320.........330.........340.........350.........360........
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Query Sequence  . . . . . . . . . NHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYK
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Template Sequence  KDGVYEFGGQSVTVRGRTALLSDGTLAGS. ILKMNEGARHMREFTNCSWTDIANITSENAAKQL. . GIFDRKGSVTVGKD
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STTTT
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B
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TT..T
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   289290.........300.........310....... ..320.........330.........340.........350. ........360.....
 
   369370.........380.........390.........400.........410......
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Query Sequence  ADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQF
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Template Sequence  ADLVIVSSD. . . . . . . . . . . . . . . . . . . . CEVILTICRGNIAFISKEA
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   366...370.... .....380.........390...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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