Job Description Q46812 Confidence 100.00% Date Thu Jan 5 12:34:40 GMT 2012 Rank 20 Aligned Residues 398 % Identity 19% Template c2oodA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:blr3880 protein; PDBTitle: crystal structure of guanine deaminase from bradyrhizobium japonicum Resolution 2.62 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.													.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query Sequence		I	L	K	N	V	T	A	V	Q	L	H	P	A	.	.	.	.	.	.	.	.	.	.	.	.	K	V	Q	E	G	V	D	I	A	I	E	N	D	V	I	V	A	I	G	D	A	L	T	Q	R	.	.	Y	P	D	A	S	F	K	E	M	H	G	R	I	V	M	P	G	I	V	C	S	H	N	H	F	Y	S	G
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation
Template Sequence		V	G	I	R	G	T	F	F	D	F	V	D	D	P	W	K	H	I	G	N	E	Q	A	A	A	R	F	H	Q	D	G	L	X	V	V	T	D	G	V	I	K	A	F	G	P	Y	E	K	I	A	A	A	H	P	G	V	E	I	T	H	I	K	D	R	I	I	V	P	G	F	I	D	G	H	I	H	L	P	Q	T
Template Known Secondary structure												S	S		G	G	G	S	T	T		G	G	G	G													S	S	B														S	T	T																						G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	R	G	I	M	A	N	I	A	P	C	P	D	F	I	S	T	L	K	N	L	W	W	R	L	D	R	A	L	D	E	E	S	L	Y	Y	S	G	L	I	C	S	L	E	A	I	K	S	G	C	T	S	V	I	D	H	H	A	S	P	A	Y	I	G	G	S	L	S	T	L	R	D	A	F	L	K	V	G	L
Query Conservation
Alig confidence										.	.	.	.																																															.	.	.
Template Conservation										.	.	.	.																																															.	.	.
Template Sequence		R	V	L	G	A	Y	G	E	.	.	.	.	Q	L	L	P	W	L	Q	K	S	I	Y	P	E	E	I	K	Y	K	D	R	N	Y	A	R	E	G	V	K	R	F	L	D	A	L	L	A	A	G	T	T	T	C	Q	A	F	T	.	.	.	S	S	S	P	V	A	T	E	E	L	F	E	E	A	S	R	R	N	X
Template Known Secondary structure		T		T	T			S		.	.	.	.										T					G	G	G	G	S																		T	T									.	.	.		S	S															T
Template Predicted Secondary structure										.	.	.	.																																															.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		R	A	M	T	C	F	E	T	T	D	R	N	N	G	I	K	E	L	Q	E	G	V	E	E	N	I	R	F	A	R	L	I	D	E	A	K	K	A	T	S	E	P	Y	L	V	E	A	H	I	G	A	H	A	P	F	T	V	P	D	A	G	L	E	M	L	R	E	A	V	K	A	T	.	G	R	G	L	H	I	H
Query Conservation																																																																										.
Alig confidence																																				.	.	.	.																																			.
Template Conservation																																				.	.	.	.
Template Sequence		R	V	I	A	G	L	T	G	I	D	R	N	A	P	A	E	F	I	D	T	P	E	N	F	Y	R	D	S	K	R	L	I	A	Q	.	.	.	.	Y	H	D	K	G	R	N	L	Y	A	I	T	P	R	F	A	F	G	A	S	P	E	L	L	K	A	C	Q	R	L	K	H	E	H	P	D	C	W	V	N	T	H
Template Known Secondary structure												S	S	S		T	T	T																		.	.	.	.		T	T	B	T	T									B	G	G	G																	T	T	S
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																	.	.																																																												.	.	.	.
Query SS confidence																	.	.																																																												.	.	.	.
Query Sequence		A	A	E	D	L	Y	D	V	S	Y	S	H	H	W	Y	.	.	G	K	D	L	L	A	R	L	A	Q	F	D	L	I	D	S	K	T	L	V	A	H	G	L	Y	L	S	K	D	D	I	T	L	L	N	Q	R	D	A	F	L	V	H	N	A	R	S	N	M	N	N	H	V	G	Y	N	H	H	L	.	.	.	.
Query Conservation																	.	.																																																												.	.	.	.
Alig confidence																	.	.																																																												.	.	.	.
Template Conservation
Template Sequence		I	S	E	N	P	A	E	C	S	G	V	L	V	E	H	P	D	C	Q	D	Y	L	G	V	Y	E	K	F	D	L	V	G	P	K	F	S	G	G	H	G	V	Y	L	S	N	N	E	F	R	R	X	S	K	K	G	A	A	V	V	F	C	P	C	S	N	L	F	L	G	S	G	L	F	R	L	G	R	A	T	D
Template Known Secondary structure			S														T	T		S	S							T	T	T			S	T	T							T	T													T													T	T										T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
			302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.																								.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	S	D	I	R	N	L	A	L	G	T	D	G	I	G	S	D	M	F	E	E	M	K	F	A	F	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	D	A	G	G	P	L	W	P	D	S	F	A	K	A	L	T	N	G	N	E	L	M	S	R	N	F	G
Query Conservation		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																																																																													.	.
Template Sequence		P	E	H	R	V	K	X	S	F	G	T	D	V	G	G	G	N	R	F	S	X	I	S	V	L	D	D	A	Y	K	V	G	X	C	N	N	T	L	L	D	G	S	I	D	P	S	R	K	D	L	A	E	A	E	R	N	K	L	S	P	Y	R	G	F	W	S	V	T	L	G	G	A	E	G	L	.	.	Y	I	D
Template Known Secondary structure		T	T	S										B	T	T	B	S																						S	S	S	S	S		G	G	G									T											T	T							T	.	.	T		T
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.			390	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.																	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	F	G	L	L	E	A	G	Y	K	A	D	L	T	I	C	D	Y	N	S	P	T	P	L	L	A	D	N	I	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	A	F	G	M	G	S	G	S	V	H	S	V	M	V	N	G	V	M	V	Y	E	D
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	K	L	G	N	F	E	P	G	K	E	A	D	F	V	A	L	D	P	N	G	G	Q	L	A	Q	P	W	H	Q	S	L	I	G	A	G	P	R	T	V	D	E	A	A	S	X	L	F	A	V	X	X	V	G	D	D	R	C	V	D	E	T	W	V	X	G	K	R	L	Y	K	K
Template Known Secondary structure		T	T	S	S	S			T	T	S	B								T	T		S	S	T	T						T	T				S			S																	G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.