Job Description Q46812 Confidence 100.00% Date Thu Jan 5 12:34:40 GMT 2012 Rank 26 Aligned Residues 400 % Identity 16% Template c2gwnA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:dihydroorotase; PDBTitle: the structure of putative dihydroorotase from porphyromonas2 gingivalis. Resolution 1.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		L	I	L	K	N	V	T	A	V	Q	L	H	P	A	K	V	Q	E	G	V	D	I	A	I	E	N	D	V	I	V	A	I	G	D	A	L	T	Q	R	.	.	.	Y	P	D	A	S	F	K	E	M	H	G	R	I	V	M	P	G	I	V	C	S	H	N	H	F	Y	S	G	L	S	R	G	I	M	A	N	I	A
Query Conservation																																									.	.	.
Alig confidence															.	.	.																								.	.	.
Template Conservation															.	.	.
Template Sequence		I	L	L	R	N	A	L	I	T	N	E	G	K	.	.	.	T	F	P	G	S	V	X	I	D	G	A	F	I	S	R	I	I	E	G	E	L	P	A	D	D	N	L	S	A	D	E	V	I	E	C	S	G	L	R	L	F	P	G	C	I	D	D	Q	V	H	F	R	E	P	G	L	T	H	K	A	T	I	A	S
Template Known Secondary structure												T	T		.	.	.										T	T								S				T	T			T	T		S						T	T																T	T	T		T	T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	C	P	D	F	I	S	T	L	K	N	L	W	W	R	L	D	R	A	L	D	E	E	S	L	Y	Y	S	G	L	I	C	S	L	E	A	I	K	S	G	C	T	S	V	I	D	H	H	A	S	P	A	Y	I	G	G	S	L	S	T	L	R	D	A	F	L	K	V	G	L	R	A	M	T	C	F	E	T	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	R	A	A	V	A	G	G	V	T	S	F	X	D	X	P	N	T	N	P	P	T	T	X	W	E	R	L	L	E	K	R	Q	I	G	A	D	T	A	W	A	N	Y	G	F	F	F	G	G	T	N	D	N	I	D	E	I	K	R	V	D	K	H	L	V	P	G	L	L	F	L	G	S	S	T	G	N	X	L
Template Known Secondary structure									T	T								S		S	S	S		S		S																S	S										S	S							T			T	T	S		S				B	S	S	S			G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.										.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	N	G	I	K	E	L	Q	E	G	V	E	E	N	.	.	.	.	.	.	.	.	.	I	R	F	A	R	L	I	D	E	A	K	K	A	T	S	E	P	Y	L	V	E	A	H	I	G	A	H	A	P	F	T	V	P	D	A	G	L	E	M	L	R	E	A	V	K	A	T	G	R	G	L	H	I	H	A	A
Query Conservation																	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	N	K	E	T	L	E	K	I	F	G	E	C	D	L	L	I	A	T	H	C	E	K	E	E	I	I	R	A	N	K	E	H	Y	K	A	K	Y	G	N	D	L	D	I	H	F	H	P	L	I	R	S	E	E	A	C	Y	R	S	S	A	E	A	V	E	L	A	E	R	X	N	A	R	L	H	I	L	H	L
Template Known Secondary structure																	S					B																				S				G	G	G					S																				T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	L	Y	D	V	S	Y	S	H	H	W	Y	G	K	D	L	L	A	R	L	A	Q	F	D	L	I	D	S	K	T	L	V	A	H	G	L	Y	L	S	K	D	D	I	T	L	L	N	Q	R	D	A	F	L	V	H	N	A	R	S	N	M	N	N	H	V	G	Y	N	H	H	L	S	D	I	R	N	L	A	L
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.																																.	.
Template Conservation													.	.	.	.	.	.	.	.																																.	.
Template Sequence		S	T	E	K	E	L	S	L	F	R	N	.	.	.	.	.	.	.	.	D	I	P	T	A	Q	K	R	I	T	S	E	V	C	V	H	H	L	W	F	S	D	T	D	Y	G	R	L	G	N	R	.	.	I	K	W	N	P	A	I	K	K	E	S	D	R	E	A	L	R	A	A	V	R	N	G	R	I	D	I	I
Template Known Secondary structure				T	G	G	G	G	G	S			.	.	.	.	.	.	.	.	S	S		G	G	G		S														G	G	G					G	G	G	.	.	G			S	S																		S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.																																.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.									.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		310	.	.	.	.	.	.	.	.	.	320	.																	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	D	G	I	G	S	D	M	F	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	F	A	F	F	K	H	R	D	A	G	G	P	L	W	P	D	S	F	A	K	A	L	T	N	G	N	E	L	M	S	R	N	F	G	A	K	F	G	L	L	E	A	G	Y	K	A	D	L	T	I
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation																																																															.	.	.
Template Sequence		A	T	D	H	A	P	H	L	L	R	E	K	E	G	S	C	L	Q	A	A	S	G	G	P	L	V	Q	H	S	L	L	A	L	L	E	L	C	N	Q	G	I	F	S	I	E	E	I	V	S	K	T	A	H	I	P	A	T	L	F	A	I	.	.	.	E	K	R	G	Y	I	R	P	G	Y	Y	A	D	L	V	L
Template Known Secondary structure					B										S		T	T	T	S							T	T	T											T	T	S	S										T								T	B	.	.	.	T	T		S	S			T	T	S	B
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.				.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.						400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		C	D	Y	N	S	P	T	P	L	L	A	D	N	I	A	G	H	I	A	F	G	M	G	S	G	S	.	.	.	.	.	V	H	S	V	M	V	N	G	V	M	V	Y	E	D	R	Q	F	N
Query Conservation																												.	.	.	.	.
Alig confidence																												.	.	.	.	.
Template Conservation
Template Sequence		V	D	P	S	S	P	H	T	V	S	A	D	N	I	L	S	L	C	G	W	S	P	F	E	G	F	T	F	S	H	S	V	A	Y	T	F	V	N	G	C	L	A	Y	A	K	G	R	L	A
Template Known Secondary structure				T	T	S						T	T	T			S	T	T				T	T	T	T				S									T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.