Job Description Q46812 Confidence 100.00% Date Thu Jan 5 12:34:40 GMT 2012 Rank 15 Aligned Residues 399 % Identity 14% Template c1nfgA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:d-hydantoinase; PDBTitle: structure of d-hydantoinase Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	L	K	N	V	T	A	V	Q	L	H	P	A	K	V	Q	E	G	V	D	I	A	I	E	N	D	V	I	V	A	I	G	D	A	L	T	Q	R	Y	P	D	A	S	F	K	E	M	H	G	R	I	V	M	P	G	I	V	C	S	H	N	H	F	Y	S	G	L	S	R	G	I	M	A	N	I	A	P	C	P
Query Conservation
Alig confidence															.	.	.																						.	.	.
Template Conservation															.	.	.																						.	.	.
Template Sequence		I	I	I	K	N	G	T	I	V	T	A	D	G	.	.	.	I	S	R	A	D	L	G	I	K	D	G	K	I	T	Q	I	G	G	A	L	G	.	.	.	P	A	E	R	T	I	D	A	A	G	R	Y	V	F	P	G	G	I	D	V	H	T	H	V	E	T	V	S	F	N	T	Q	S	A	D	T	F	A	T	A
Template Known Secondary structure												T	T		.	.	.										T	T						S	S				.	.	.			S						T	T															S				T	T				S
Template Predicted Secondary structure															.	.	.																						.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		82	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		D	F	.	.	I	S	T	L	K	N	L	W	W	R	L	D	R	A	L	D	E	E	S	L	Y	Y	S	G	L	I	C	S	L	E	A	I	K	S	G	C	T	S	V	I	D	H	H	A	S	P	A	Y	I	G	G	S	L	S	T	L	R	D	A	F	L	K	V	G	L	R	A	M	T	C	F	E	T	T	D	R
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		T	V	A	A	A	C	G	G	T	T	T	I	V	D	F	C	Q	Q	D	R	G	H	S	L	A	E	A	V	A	K	W	D	G	M	A	G	G	K	S	A	I	D	Y	G	Y	H	I	I	V	L	D	P	T	D	S	V	I	E	E	L	E	V	L	P	D	L	G	I	T	S	F	V	F	M	A	Y	R	G	M	N
Template Known Secondary structure								T	T												T	T	S														T	T	T		S	S									S	S									T	T	T	G	G	G	G	T			B			B	S	S	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.												.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	N	G	I	K	E	L	Q	E	G	V	E	E	N	I	R	F	.	.	.	.	.	.	.	.	.	.	.	A	R	L	I	D	E	A	K	K	A	T	S	E	P	Y	L	V	E	A	H	I	G	A	H	A	P	F	T	V	P	D	A	G	L	E	M	L	R	E	A	V	K	A	T	G	R	G	L	H	I	H	A
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	I	D	D	V	T	L	L	K	T	L	D	K	A	V	K	T	G	S	L	V	M	V	H	A	E	N	G	D	A	A	D	Y	L	R	D	K	F	V	A	E	G	K	T	A	P	I	Y	H	A	L	S	R	P	P	R	V	E	A	E	A	T	A	R	A	L	A	L	A	E	I	V	N	A	P	I	Y	I	V	H
Template Known Secondary structure		B																	T		B				B																	T	T			S	T						T	S																				T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		A	E	D	L	Y	D	V	S	Y	S	H	H	W	Y	G	K	D	L	L	A	R	L	A	Q	F	D	L	I	D	S	K	T	L	V	A	H	G	L	Y	L	S	K	D	D	I	T	L	L	N	Q	R	D	A	F	L	V	H	N	A	R	S	N	M	N	N	H	.	V	G	Y	N	H	H	L	S	D	I	R	N	L
Query Conservation																																																																				.
Alig confidence											.	.	.	.	.	.	.	.	.																																																	.
Template Conservation											.	.	.	.	.	.	.	.	.
Template Sequence		V	T	C	E	E	S	L	E	E	.	.	.	.	.	.	.	.	.	V	M	R	A	K	S	R	G	V	R	A	L	A	E	T	C	T	H	Y	L	Y	L	T	K	E	D	L	E	R	P	D	F	E	G	A	K	Y	V	F	T	P	P	A	R	A	K	K	D	H	D	V	L	W	N	A	L	R	N	G	V	F	E
Template Known Secondary structure				S							.	.	.	.	.	.	.	.	.								T									G	G	G	G	T			G	G	G	G	G		T	T	T	G	G	G	G	G			S	S																	T	T			S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.										.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320																					.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	G	T	D	G	I	G	S	D	M	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	K	F	A	F	F	K	H	R	D	A	G	G	P	L	W	P	D	S	F	A	K	A	L	T	N	G	N	E	L	M	S	R	N	F	G	A	K	F	G	L	L	E	A	G	Y
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.
Template Conservation																																																																			.	.
Template Sequence		T	V	S	S	D	H	C	S	W	L	F	K	G	H	K	D	R	G	R	N	D	F	R	A	I	P	N	G	A	P	G	V	E	E	R	L	M	M	V	Y	Q	G	V	N	E	G	R	I	S	L	T	Q	F	V	E	L	V	A	T	R	P	A	K	V	F	.	.	G	M	F	P	Q	K	G	T	I	A	V	G	S
Template Known Secondary structure							B					T	T	T	T	T	T	T	T	T	T		G	G	G	S				B			T	T	T											T	T	S	S										T							T	.	.	T		T	T	T	S	S	S		S	T	T	S
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.	.	.	380	.	.	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.						.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		K	A	D	L	T	I	C	D	Y	N	S	P	T	P	L	L	A	D	N	I	A	G	H	I	A	F	G	M	G	S	G	.	.	.	.	.	S	V	H	S	V	M	V	N	G	V	M	V	Y	E	D	R	Q	F	N
Query Conservation																																	.	.	.	.	.
Alig confidence																																	.	.	.	.	.
Template Conservation
Template Sequence		D	A	D	I	V	L	W	D	P	E	A	E	M	V	I	E	Q	T	A	M	H	N	A	M	D	Y	S	S	Y	E	G	H	K	V	K	G	V	P	K	T	V	L	L	R	G	K	V	I	V	D	E	G	S	Y	V
Template Known Secondary structure		B																G	G	G	S		S	S		S			T	T	T	T													T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.