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Job DescriptionQ46812
Confidence100.00%DateThu Jan 5 12:34:40 GMT 2012
Rank17Aligned Residues403
% Identity16%Templatec1gkrA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:non-atp dependent l-selective hydantoinase; PDBTitle: l-hydantoinase (dihydropyrimidinase) from arthrobacter2 aurescens
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70....... ..80
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Query Sequence  LILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANI. APC
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Template Sequence  VIVKNCRLVSSDG. . . ITEADILVKDGKVAAISADTSD. VEASRTIDAGGKFVMPGVVDEHVHIIDMDLKNRYGRFELDS
Template Known Secondary structure  TT...TTS

TT.


TT




GGGTTTS

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   4.....10...... ...20.........30........ .40.........50.........60.........70.........
 
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Query Sequence  PDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRN
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Template Sequence  ESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLKVDFALYGGGVPGNLPEIRKMHDAGAVGFSMMAASVPGMFDA
Template Known Secondary structure  T
S
SSS
S
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SSB



TT
TT

B

BSS
SBTTTB
B
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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   161........170...... ...180.........190.........200.........210.........220.........
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Query Sequence  NGIKELQEGVEENIRF. . . . . . . . . . . ARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAA
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Template Sequence  VSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEAGCRLIVLHV
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T
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   230.........240.........250.........260.........270.........280.........290.........300.........
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Query Sequence  EDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLAL
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Template Sequence  SNPDGVEL. . . . . . . . . IHQAQSEGQDVHCESGPQYLNITTDDAERIGPYMKV. . APPVRSAEMNIRLWEQLENGLIDTL
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S.........TT


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GGGGGGG

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T


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   241....... .250.........260.........270.........280.... .....290.........300.........
 
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Query Sequence  GTDGIGSD. . . . . . . . . . . . . . . . . . . . MFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKA
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Template Sequence  GSDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRLSLERLVEVMCEKPAKLF. . GIYPQKGTLQVGSDA
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GGGTGGGGT
GGGS


B

TTTTGGGTSS
T..T
TTTSSS

TTSB
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   310.........320.........330.........340.........350.........360.........370.. .......380.......
 
   370.........380.........390........ .400.........410.........420.
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Query Sequence  DLTICDYNSPTPLLADNIAGHIAFGMGSG. . . . . SVHSVMVNGVMVYEDRQFNFDCD
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Template Sequence  DLLILDLDIDTKVDASQFRSLHKYSPFDGMPVTGAPVLTMVRGTVVAEKGEVLVEQG
Template Known Secondary structure 
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GGG
SSS



TTTT


TTTT
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   388.390.........400.........410.........420.........430.........440....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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