Return to main results Retrieve Phyre Job Id

Job DescriptionP76062
Confidence92.88%DateThu Jan 5 12:18:01 GMT 2012
Rank12Aligned Residues53
% Identity9%Templated1y9qa1
SCOP infolambda repressor-like DNA-binding domains lambda repressor-like DNA-binding domains Probable transcriptional regulator VC1968, N-terminal domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40........ .50.........60..
Predicted Secondary structure 













.


Query SS confidence 











































.













Query Sequence  KDLGRAIEQAINKKIASGSVKSKAEVARHFKVQPPSIYDWIKKG. SISKDKLPELWRFF
Query Conservation    

 


 

 

   
 
 

  

 

 





 



 
.

 
 

  
  

Alig confidence 















.....






















.













Template Conservation    

 


  
   
 .....

  

   


   

  
 
   
    
  

  
Template Sequence  SQIANQLKNLRKSRGL. . . . . SLDATAQLTGVSKAXLGQIERGESSPTIATLWKIASGL
Template Known Secondary structure  TT
.....
SS
TT
S


Template Predicted Secondary structure 


.....







Template SS confidence 


























































   10.........20..... ....30.........40.........50.........60...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions