Return to main results Retrieve Phyre Job Id

Job DescriptionP76062
Confidence54.71%DateThu Jan 5 12:18:01 GMT 2012
Rank70Aligned Residues39
% Identity18%Templated1jhfa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LexA repressor, N-terminal DNA-binding domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30....... ..40......
Predicted Secondary structure 









.


Query SS confidence 
































.








Query Sequence  KDLGRAIEQAINKKIASGSVKSKAEVARHFKVQ. PPSIYDWIK
Query Conservation    

 


 

 

   
 
 

  

 

 

.



 



Alig confidence 

















...











.








Template Conservation    

 

       
  
...




    
  
  

  

 
Template Sequence  QEVFDLIRDHISQTGMPP. . . TRAEIAQRLGFRSPNAAEEHLK
Template Known Secondary structure  SS

...
TT
SS
Template Predicted Secondary structure 




...





Template SS confidence 










































   910.........20...... ...30.........40........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions