 |
Job Description | P76062 | Confidence | 25.81% | Date | Thu Jan 5 12:18:01 GMT 2012 |
Rank | 98 | Aligned Residues | 38 |
% Identity | 18% | Template | c3hefB_ |
PDB info |
PDB header:viral protein | Chain: B: PDB Molecule:gene 1 protein; |
PDBTitle: crystal structure of the bacteriophage sf6 terminase small2 subunit
|
Resolution | 1.65 Å |
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
. | . | . | 40 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | A | I | E | Q | A | I | N | K | K | I | A | S | G | S | V | K | S | K | A | E | V | A | R | H | F | K | V | . |
Q | P | P | S | I | Y | D | W | I | K | K | G |
Query Conservation |   |
  |
|
|
|   |
|
|   |
|
|   |   |   |
|   |
|   |
|
|   |   |
|
|   |
|
|   |
| . |
|
|
|
|
|   |
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
|   |   |   |
|
|   |
|   | . | . |
|
|   |   |
|
|   |   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
P | E | V | A | D | D | I | C | S | L | L | S | S | G | E | . |
. |
S | L | L | K | V | C | K | R | P | G | M | P | D | K | S | T | V | F | R | W | L | A | K | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . |
|  |  |  |  | T | T | S | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|  | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|