Job Description P76062 Confidence 47.76% Date Thu Jan 5 12:18:01 GMT 2012 Rank 74 Aligned Residues 54 % Identity 13% Template c3gn5B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021); PDBTitle: structure of the e. coli protein mqsa (ygit/b3021) Resolution 2.15 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		G	R	A	I	E	Q	A	I	N	K	K	I	A	S	G	S	V	K	S	K	A	E	V	A	R	H	F	K	V	Q	P	P	S	I	Y	D	W	I	K	K	G	S	I	S	K	D	.	.	K	L	P	E	L	W	R	F	F	S	D	V	V
Query Conservation																																																.	.
Alig confidence															.	.	.	.	.																													.	.
Template Conservation															.	.	.	.	.
Template Sequence		P	E	F	I	V	K	V	R	K	K	L	S	L	.	.	.	.	.	T	Q	K	E	A	S	E	I	F	G	G	G	V	N	A	F	S	R	Y	E	K	G	N	A	P	H	P	S	T	I	K	L	L	R	V	L	D	K	H	P	E	L	L
Template Known Secondary structure												T	T		.	.	.	.	.											S		T	T								T																		G	G	G
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.						.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions