Return to main results Retrieve Phyre Job Id

Job DescriptionP76062
Confidence93.87%DateThu Jan 5 12:18:01 GMT 2012
Rank6Aligned Residues57
% Identity11%Templatec3dnvB_
PDB info PDB header:transcription/dnaChain: B: PDB Molecule:hth-type transcriptional regulator hipb; PDBTitle: mdt protein
Resolution2.68 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40...... ...50.........60..
Predicted Secondary structure 















.



Query SS confidence 













































.















Query Sequence  MLSGKDLGRAIEQAINKKIASGSVKSKAEVARHFKVQPPSIYDWIK. KGSISKDKLPELWRFF
Query Conservation 



  

 


 

 

   
 
 

  

 

 





 



. 


 
 

  
  

Alig confidence 



















.....




















.















Template Conservation 
     

  

  
   

.....

 


   


   

  
 
   

   
  

  
Template Sequence  IYSPTQLANAMKLVRQQNGW. . . . . TQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSL
Template Known Secondary structure 

STT
.....
T


GGG

T
Template Predicted Secondary structure 





.....










Template SS confidence 






























































   7..10.........20...... ...30.........40.........50.........60....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions