Return to main results Retrieve Phyre Job Id

Job DescriptionP76062
Confidence58.51%DateThu Jan 5 12:18:01 GMT 2012
Rank64Aligned Residues42
% Identity19%Templatec1u78A_
PDB info PDB header:dna binding protein/dnaChain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna
Resolution2.69 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........
Predicted Secondary structure 

















Query SS confidence 
















































Query Sequence  MLSGKDLGRAIEQAINKKIASGSVKSKAEVARHFKVQPPSIYDWIKKGS
Query Conservation 



  

 


 

 

   
 
 

  

 

 





 



 

Alig confidence 













..



.....























Template Conservation   

   
  
  
 ..  
 .....
   

  

 
  

   

   
Template Sequence  ALSDTERAQLDVMK. . LLNV. . . . . SLHEMSRKISRSRHCIRVYLKDPV
Template Known Secondary structure 


..TT
.....
T

SGG
Template Predicted Secondary structure 


..


.....



Template SS confidence 
















































   6...10......... 20... ......30.........40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions