Job Description P0A6I3 Confidence 98.38% Date Thu Jan 5 11:03:12 GMT 2012 Rank 63 Aligned Residues 150 % Identity 17% Template d2iyva1 SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Shikimate kinase (AroK) Resolution 1.35

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	I	I	S	I	A	G	S	V	A	V	G	K	S	T	T	A	R	V	L	Q	A	L	L	S	R	W	P	E	H	R	R	V	E	L	I	T	T	D	G	F	L	H	P	N	Q	V	L	K	E	R	G	L	M	K	K	K	G	F	P	E	S	Y	D	M	H	R	L	V	K	F	V	S	D	L	K	S	G	V
Query Conservation
Alig confidence						.																						.	.	.	.	.	.	.																																.	.
Template Conservation						.																						.	.	.	.	.	.	.																																.	.
Template Sequence		P	K	A	V	.	L	V	G	L	P	G	S	G	K	S	T	I	G	R	R	L	A	K	A	L	G	.	.	.	.	.	.	.	V	G	L	L	D	T	D	V	A	I	E	Q	R	T	G	R	S	I	A	D	I	F	A	T	D	G	E	Q	E	F	R	.	.	R	I	E	E	D	V	V	R	A	A	L	A	D	H
Template Known Secondary structure			S			.				S	T	T	S	S													T	.	.	.	.	.	.	.															S	S																.	.
Template Predicted Secondary structure						.																						.	.	.	.	.	.	.																																.	.
Template SS confidence
		3	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.								.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	V	T	A	P	V	Y	S	H	L	I	Y	D	V	I	P	D	G	D	K	T	V	V	Q	P	D	I	L	I	L	E	G	L	N	V	L	Q	S	G	M	D	Y	P	H	D	P	H	H	V	F	V	S	D	F	V	D	F	S	I	Y	V	D	A	P	E	D	L	L	Q	T	W	Y	I	N	R	F	L	K	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																						.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	V	L	S	L	G	G	G	A	V	T	S	P	G	V	R	A	A	L	A	.	.	.	.	.	.	.	.	G	H	T	V	V	Y	L	E	I	S	A	A	E	G	V	R	R	T	G	G	N	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S						T	T	G	G	G	S								T	.	.	.	.	.	.	.	.	T	S																T	T			.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																						.	.	.	.
Template SS confidence
																												73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.									.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	G	A	F	T	D	P	D	S	Y	F	H	N	Y	A	K	L	T	K	E	E	A	I	K	T	A	M	T	L	W	K	E	I	N	W	L	N	L	K	Q	N	I	L	P	T	R	E	R	A	S	L	I	L	T	K	S	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	T	V	R	P	L	L	A	G	P	D	R	A	E	K	Y	R	A	L	M	.	.	.	.	.	.	.	.	A	K	R	A	P	L	Y	R	R	V	A	T	M	R	V	D	T	N	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.				S	S	T	T	S												.	.	.	.	.	.	.	.												S						S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template SS confidence
														115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.									.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions