Job Description P0A6I3 Confidence 96.13% Date Thu Jan 5 11:03:12 GMT 2012 Rank 369 Aligned Residues 123 % Identity 9% Template c3qmzA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:cytoplasmic dynein heavy chain; PDBTitle: crystal structure of the cytoplasmic dynein heavy chain motor domain Resolution 6.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		M	S	I	K	E	Q	T	L	M	T	P	Y	L	Q	F	D	R	N	Q	W	A	A	L	R	D	S	V	P	M	T	L	S	E	D	E	I	A	R	L	K	G	I	N	E	D	L	S	L	E	E	V	A	E	I	Y	L	P	L	S	R	L	L	N	F	Y	I	S	S	N	L	R	R	.	.	.	Q	A	V	L	E
Query Conservation																																																																										.	.	.
Alig confidence																																																																										.	.	.
Template Conservation
Template Sequence		C	S	S	M	N	H	Y	H	F	G	L	R	T	L	K	G	V	L	R	N	C	S	P	L	I	S	E	F	G	E	G	E	K	T	V	V	E	S	L	K	R	V	I	L	P	S	L	G	D	T	D	E	L	V	F	K	D	E	L	S	K	S	K	A	I	V	Q	C	L	K	D	A	G	E	E	F	L	K	K	C
Template Known Secondary structure				S	S	S																							S	S		S	S													S	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		1960	.	.	.	.	.	.	.	.	.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.	.	.	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	L	G	T	N	G	Q	R	I	P	Y	I	I	S	I	A	G	S	V	A	V	G	K	S	T	T	A	R	V	L	Q	A	L	L	S	R	W	P	E	H	R	R	V	E	L	I
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		M	Q	F	Y	Y	M	Q	K	T	Q	Q	A	L	I	.	L	V	G	K	A	G	C	G	K	T	A	T	W	K	T	V	I	D	A	M	A	I	F	D	G	H	A	N	V	V	Y	V
Template Known Secondary structure									S	S						.					T	T	S	S	T	T													T	S	S
Template Predicted Secondary structure																.
Template SS confidence
		2058	.	2060	.	.	.	.	.	.	.	.	.	2070	.		.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions