Job Description P0A6I3 Confidence 98.82% Date Thu Jan 5 11:03:12 GMT 2012 Rank 28 Aligned Residues 176 % Identity 18% Template c3akcA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cytidylate kinase; PDBTitle: crystal structure of cmp kinase in complex with cdp and adp from2 thermus thermophilus hb8 Resolution 1.65 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	S	I	A	G	S	V	A	V	G	K	S	T	T	A	R	V	L	Q	A	L	L	S	R	W	P	E	H	R	R	V	E	L	I	T	T	D	G	F	L	H	P	N	Q	V	L	K	E	R	G	L	M	K	K	K	G	F	P	E	S	Y	D	M	H	R	L	V	K	F	V	S	D	L	K	S	G	V	P	N
Query Conservation
Alig confidence																										.	.	.	.	.	.	.																										.
Template Conservation																										.	.	.	.	.	.	.																										.
Template Sequence		I	V	T	I	D	G	P	S	A	S	G	K	S	S	V	A	R	R	V	A	A	A	L	G	.	.	.	.	.	.	.	V	P	Y	L	S	S	G	L	L	Y	R	A	A	A	F	L	A	L	R	A	G	V	D	P	G	.	D	E	E	G	L	L	A	L	L	E	G	L	G	V	R	L	L	A	Q	A	E	G	N
Template Known Secondary structure								S	T	T	S	S													T	.	.	.	.	.	.	.																					T			T	T	.													T							T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.																										.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.								.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	A	P	V	Y	S	H	L	I	Y	D	V	I	P	D	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	V	V	Q	P	D	I	L	I	L	E	G	L	N	V	L	Q	S	G	M	D	Y	P	H	D	P	H	H	V	F	V	S	D	F	V	D	F	S	I	Y	V	D
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	L	A	D	G	E	D	L	T	S	F	L	H	T	P	E	V	D	R	V	V	S	A	V	A	R	L	P	G	V	R	A	W	V	N	R	R	L	K	E	V	P	P	P	F	V	A	E	G	R	D	M	G	T	A	.	.	.	.	.	.	.	.	.	.	.	.	V	F	P	E	A	A	H	K	F	Y	L	T
Template Known Secondary structure						T	T				G	G	G	S	S	S												T														T	S		S							S	S					.	.	.	.	.	.	.	.	.	.	.	.			T	T		S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.													.	.	.	.	.	.	.	.	140	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	E	D	L	L	Q	T	W	Y	I	N	R	F	L	K	F	R	E	G	A	F	T	D	P	D	S	Y	F	H	N	Y	A	K	L	T	K	E	E	A	I	K	T	A	M	T	L	W	K	E	I	N	W	L	N	L	K	Q	N	I	L	P	T	R	E	R	A	S	L	I	L	T	K	S	A	N	H	A	V	E
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		A	S	P	E	V	R	A	W	R	R	A	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	Q	A	Y	E	E	V	L	R	D	L	L	R	R	D	.	.	.	.	.	.	.	.	E	R	D	K	A	Q	S	A	P	A	P	D	A	L	V	L	D	T	G	G	M	T	L	D
Template Known Secondary structure													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S														.	.	.	.	.	.	.	.			T	G	G	G					T	T							T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.																				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.									.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		311	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		197	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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