Job Description P0A6I3 Confidence 96.98% Date Thu Jan 5 11:03:12 GMT 2012 Rank 208 Aligned Residues 147 % Identity 15% Template c2v9pH_ PDB info PDB header:hydrolase Chain: H: PDB Molecule:replication protein e1; PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 dna-free form Resolution 3.00 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	T	L	S	E	D	E	I	A	R	L	K	G	I	N	E	D	L	S	L	E	E	V	A	E	I	Y	L	P	L	S	R	L	L	N	F	Y	I	S	S	N	L	R	R	Q	A	V	L	E	Q	F	L	G	T	N	G	Q	R	I	P	Y	I	I	S	I	A	G	S	V	A	V	G	K	S	T	T	A	R	V
Query Conservation
Alig confidence																												.	.	.	.	.	.	.																												.	.
Template Conservation																												.	.	.	.	.	.	.																												.	.
Template Sequence		A	L	S	M	P	A	Y	I	K	A	R	C	K	L	A	T	G	E	G	S	W	K	S	I	L	T	.	.	.	.	.	.	.	F	F	N	Y	Q	N	I	E	L	I	T	F	I	N	A	L	K	L	W	L	K	G	I	P	K	K	N	.	.	C	L	A	F	I	G	P	P	N	T	G	K	S	M	L	C	N	S
Template Known Secondary structure			S															S	S									.	.	.	.	.	.	.					T	T																T		T	T		S	.	.							S	S	S	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.																												.	.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400								.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.			.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	A	L	L	S	R	W	P	E	H	R	R	V	E	L	I	T	T	D	G	F	L	H	P	N	Q	V	L	K	E	R	G	L	M	K	K	K	G	F	P	E	S	Y	D	M	H	R	L	V	K	F	V	S	D	L	K	S	G	V	P	N	V	T	A	P	V	Y	S	H	L	I	Y	D	V	I	P	D	G	D
Query Conservation
Alig confidence								.	.	.	.	.																																		.																	.				.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.																																		.																	.				.	.	.	.	.	.	.	.
Template Sequence		L	I	H	F	L	G	.	.	.	.	.	G	S	V	L	S	F	A	N	H	K	S	H	F	W	L	A	S	L	A	D	T	R	A	A	L	V	D	D	A	T	H	A	C	.	W	R	Y	F	D	T	Y	L	R	N	A	L	D	G	Y	P	.	V	S	I	.	.	.	.	.	.	.	.	D	R	K	H	K	A	A
Template Known Secondary structure							T	.	.	.	.	.						G	G	G	T	T	S	T	T	T	T	G	G	G	G	T		S						S						.													T	T			.				.	.	.	.	.	.	.	.			S	S	S
Template Predicted Secondary structure								.	.	.	.	.																																		.																	.				.	.	.	.	.	.	.	.
Template SS confidence
		446	.	.	.	450	.						.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.		.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500		.	.	.									.	.	.	.	.	.	510
		188	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	V	V	Q	P	D	I	L	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	I	K	A	P	P	L	L	V	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		511	.	.	.	.	.	.	.	.	520	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions