Job Description P0A6I3 Confidence 98.95% Date Thu Jan 5 11:03:12 GMT 2012 Rank 23 Aligned Residues 173 % Identity 18% Template c2h92C_ PDB info PDB header:transferase Chain: C: PDB Molecule:cytidylate kinase; PDBTitle: crystal structure of staphylococcus aureus cytidine2 monophosphate kinase in complex with cytidine-5'-3 monophosphate Resolution 2.30 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	I	S	I	A	G	S	V	A	V	G	K	S	T	T	A	R	V	L	Q	A	L	L	S	R	W	P	E	H	R	R	V	E	L	I	T	T	D	G	F	L	H	P	N	Q	V	L	K	E	R	G	L	M	K	K	K	G	F	P	E	S	Y	D	M	H	R	L	V	K	F	V	S	D	L	K	S	G	V	P
Query Conservation
Alig confidence																											.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	N	I	A	L	D	G	P	A	A	A	G	K	S	T	I	A	K	R	V	A	S	E	L	S	.	.	.	.	.	.	.	M	I	Y	V	D	T	G	A	M	Y	R	A	L	T	Y	K	Y	L	K	L	N	K	T	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	K	L	V	D	Q	T	T
Template Known Secondary structure										T	T	S	S												T	T	.	.	.	.	.	.	.																				T	T	S		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.							T
Template Predicted Secondary structure																											.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.								.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.															.	.	.	.	.	.	60	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																																.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	V	T	A	P	V	Y	S	H	L	I	Y	D	V	I	P	D	G	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	V	Q	P	D	I	L	I	L	E	G	L	N	V	L	Q	S	G	M	D	Y	P	H	D	P	H	H	V
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	L	T	Y	K	A	D	K	G	Q	C	V	I	L	D	N	E	D	V	T	D	F	L	R	N	N	D	V	T	Q	H	V	S	Y	V	A	S	K	E	P	V	R	S	F	A	V	K	K	Q	K	E	L	A	A	E	K	G	I	V	M	D	G	R	D	I	G	T	V	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T								T	T				G	G	G	S	S	S	S											T	S																T	T								S	S					.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	S	D	F	V	D	F	S	I	Y	V	D	A	P	E	D	L	L	Q	T	W	Y	I	N	R	F	L	K	F	R	E	G	A	F	T	D	P	D	S	Y	F	H	N	Y	A	K	L	T	K	E	E	A	I	K	T	A	M	T	L	W	K	E	I	N	W	L	N	L	K	Q	N	I	L	P	T	R	E	R	A
Query Conservation
Alig confidence		.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	V	L	P	D	A	D	L	K	V	Y	M	I	A	S	V	E	E	R	A	E	R	R	Y	K	D	N	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	I	E	S	N	F	E	D	L	K	R	D	I	E	A	R	D	Q	Y	D	M	N	R	E	I	S	P	L	R	K	A	D
Template Known Secondary structure		.			T	T		S																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																							S	S	S		S				T
Template Predicted Secondary structure		.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	I	L	T	K	S	A	N	H	A	V	E	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	V	T	L	D	T	T	G	K	S	I	E	E	V
Template Known Secondary structure		T							T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions