Job Description P0A6I3 Confidence 96.06% Date Thu Jan 5 11:03:12 GMT 2012 Rank 376 Aligned Residues 77 % Identity 17% Template c2gxaA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:replication protein e1; PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 with ssdna and mgadp Resolution 3.15 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	T	L	S	E	D	E	I	A	R	L	K	G	I	N	E	D	L	S	L	E	E	V	A	E	I	Y	L	P	L	S	R	L	L	N	F	Y	I	S	S	N	L	R	R	Q	A	V	L	E	Q	F	L	G	T	N	G	Q	R	I	P	Y	I	I	S	I	A	G	S	V	A	V	G	K	S	T	T	A	R	V
Query Conservation
Alig confidence																												.	.	.	.	.	.	.																												.	.
Template Conservation																												.	.	.	.	.	.	.																												.	.
Template Sequence		A	L	S	M	P	A	Y	I	K	A	R	C	K	L	A	T	G	E	G	S	W	K	S	I	L	T	.	.	.	.	.	.	.	F	F	N	Y	Q	N	I	E	L	I	T	F	I	N	A	L	K	L	W	L	K	G	I	P	K	K	N	.	.	C	L	A	F	I	G	P	P	N	T	G	K	S	M	L	C	N	S
Template Known Secondary structure			S															S										.	.	.	.	.	.	.					T	T															T	T		T	T			.	.							S	S	S	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.																												.	.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400								.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.			.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
		108	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	A	L	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	H	F	L	G
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		446	.	.	.	450	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions