Job Description P0A6I3 Confidence 98.90% Date Thu Jan 5 11:03:12 GMT 2012 Rank 25 Aligned Residues 144 % Identity 19% Template c1zuiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:shikimate kinase; PDBTitle: structural basis for shikimate-binding specificity of helicobacter2 pylori shikimate kinase Resolution 2.30 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	I	A	G	S	V	A	V	G	K	S	T	T	A	R	V	L	Q	A	L	L	S	R	W	P	E	H	R	R	V	E	L	I	T	T	D	G	F	L	H	P	N	Q	V	L	K	E	R	G	L	M	K	K	K	G	F	P	E	S	Y	D	M	H	R	L	V	K	F	V	S	D	L	K	S	G	V	P	N	V
Query Conservation
Alig confidence																									.	.	.	.	.	.	.											.	.																																					.	.
Template Conservation																									.	.	.	.	.	.	.											.	.																																					.	.
Template Sequence		L	V	L	I	G	F	M	G	S	G	K	S	S	L	A	Q	E	L	G	L	A	L	K	.	.	.	.	.	.	.	L	E	V	L	D	T	D	M	I	I	.	.	S	E	R	V	G	L	S	V	R	E	I	F	E	E	L	G	E	D	N	F	R	M	F	E	K	N	L	I	D	E	L	K	T	L	K	T	.	.
Template Known Secondary structure						S		T	T	S														T	.	.	.	.	.	.	.											.	.					T	S																										T	T		S	S	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.											.	.																																					.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.								.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	P	V	Y	S	H	L	I	Y	D	V	I	P	D	G	D	K	T	V	V	Q	P	D	I	L	I	L	E	G	L	N	V	L	Q	S	G	M	D	Y	P	H	D	P	H	H	V	F	V	S	D	F	V	D	F	S	I	Y	V	D	A	P	E	D	L	L	Q	T	W	Y	I	N	R	F	L	K	F	R	E	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	V	I	S	T	G	G	G	I	V	M	H	E	N	L	K	G	.	.	.	.	.	.	.	.	.	.	.	L	G	T	T	F	Y	L	K	M	D	F	E	T	L	I	K	R	L	N	Q	R	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	G	G	G		G	G	G	T	T	.	.	.	.	.	.	.	.	.	.	.	S																					.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
																									73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90												.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	T	D	P	D	S	Y	F	H	N	Y	A	K	L	T	K	E	E	A	I	K	T	A	M	T	L	W	K	E	I	N	W	L	N	L	K	Q	N	I	L	P	T	R	E	R	A	S	L	I	L	T	K	S	A	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	E	K	R	P	L	L	N	N	L	T	Q	A	K	E	L	F	.	.	.	.	.	.	.	.	E	K	R	Q	A	L	Y	E	K	N	A	S	F	I	I	D	A	R	G	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.				G	G	G	G	S									.	.	.	.	.	.	.	.												S						S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
														114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.									130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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