Job Description P27111 Confidence 95.71% Date Thu Jan 5 11:43:09 GMT 2012 Rank 124 Aligned Residues 74 % Identity 9% Template c3r0aB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196) Resolution 2.31 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.																																			.	.	.	.	.	.	.												.
Query SS confidence																		.	.	.	.																																			.	.	.	.	.	.	.												.
Query Sequence		M	L	S	R	H	I	N	Y	F	L	A	V	A	E	H	G	.	.	.	.	S	F	T	R	A	A	S	A	L	H	V	S	Q	P	A	L	S	Q	Q	I	R	Q	L	E	E	S	L	G	V	P	L	F	D	R	.	.	.	.	.	.	.	S	G	R	T	I	R	L	T	D	A	G	.	E	V	W	R	Q	Y	A
Query Conservation																		.	.	.	.																																			.	.	.	.	.	.	.												.
Alig confidence																		.	.	.	.																									.	.	.								.	.	.	.	.	.	.												.
Template Conservation																																														.	.	.
Template Sequence		L	T	K	A	D	L	N	V	X	K	S	F	L	N	E	P	D	R	W	I	D	T	D	A	L	S	K	S	L	K	L	D	V	S	T	V	Q	R	S	V	K	K	L	H	.	.	.	E	K	E	I	L	Q	R	S	Q	Q	N	L	D	G	G	G	Y	V	Y	I	Y	K	I	Y	S	K	N	Q	I	R	N	I	I
Template Known Secondary structure																S	T	T			B									T	T															.	.	.		T	T	S									T	T	S
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	A	L	Q	E	L	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	K	I	V	Q	S	W	A	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions