Job Description P27111 Confidence 71.59% Date Thu Jan 5 11:43:09 GMT 2012 Rank 250 Aligned Residues 194 % Identity 8% Template c3lr1A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:tungstate abc transporter, periplasmic tungstate- PDBTitle: the crystal structure of the tungstate abc transporter from2 geobacter sulfurreducens Resolution 1.80 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.								150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure															.																																														.	.	.	.	.	.	.
Query SS confidence															.																																														.	.	.	.	.	.	.
Query Sequence		S	L	R	I	A	V	T	P	T	F	T	S	Y	.	F	I	G	P	L	M	A	D	F	Y	A	R	Y	P	S	I	T	L	Q	L	Q	E	M	S	Q	E	K	I	E	D	M	L	C	R	D	E	L	D	V	G	I	A	F	A	P	.	.	.	.	.	.	.	V	H	S	P	E	L	E	A	I	P	L	L	T	E
Query Conservation															.																																														.	.	.	.	.	.	.
Alig confidence															.															.																															.	.	.	.	.	.	.
Template Conservation																														.
Template Sequence		R	L	K	X	S	T	T	T	S	T	Q	D	S	G	L	L	K	V	L	L	P	P	F	E	K	K	N	N	.	V	K	V	D	V	I	A	V	G	T	G	Q	A	L	K	L	G	E	A	G	D	V	D	V	V	F	V	H	A	R	K	L	E	D	K	F	V	A	D	G	F	G	V	N	R	K	D	V	X	Y	N
Template Known Secondary structure																													T	.																			T	T	S		S																T	T	S
Template Predicted Secondary structure																														.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.										200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.
Query Sequence		S	L	A	L	V	V	A	Q	H	H	P	L	A	V	H	E	Q	V	A	L	S	R	L	H	D	E	K	L	V	L	L	S	A	E	F	A	.	.	.	.	.	.	.	.	.	T	R	E	Q	I	D	H	Y	C	E	K	A	G	L	H	P	Q	V	V	I	E	A	N	S	I	S	A	V	L	E	L	I	R	R	T
Query Conservation																																						.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	V	I	V	G	P	K	N	D	P	A	G	I	A	K	A	K	T	A	A	E	A	L	K	L	L	A	T	K	G	A	T	F	I	S	R	G	D	K	S	G	T	H	T	K	E	L	D	L	W	K	S	A	G	V	D	P	K	G	N	W	Y	V	E	A	G	Q	G	X	G	P	V	I	T	X	A	T	E	R
Template Known Secondary structure									T	T		T	T		G	G	G		S	S												T								S	S	S													T	T					S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		235	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																									.	.
Query SS confidence														.	.	.																									.	.
Query Sequence		S	L	S	T	L	L	P	A	A	I	A	T	.	.	.	Q	H	D	G	L	K	A	I	S	L	A	P	P	L	L	E	R	T	A	V	L	L	R	R	.	.	K	N	S	W	Q	T	A	A	A	K	A	F	L	H	M	A
Query Conservation														.	.	.																									.	.
Alig confidence														.	.	.																									.	.
Template Conservation
Template Sequence		R	A	Y	T	L	T	D	R	G	T	Y	N	A	F	K	G	A	K	T	D	L	V	I	L	F	Q	G	L	F	N	P	Y	G	I	X	A	V	N	P	K	K	F	P	H	V	K	Y	D	L	A	X	K	L	I	D	Y	V
Template Known Secondary structure		T														B	T	T	T	B																				T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions