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Job DescriptionP27111
Confidence99.80%DateThu Jan 5 11:43:09 GMT 2012
Rank17Aligned Residues192
% Identity22%Templatec3jv9B_
PDB info PDB header:transcriptionChain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: the structure of a reduced form of oxyr from n. meningitidis
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   90.........100.........110.........120.........130.........140.........150.........160.........
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Query Sequence  RGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVV
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Template Sequence  EGAFKLGLIFTVAPYLLPKLIVSLRRTAPKXPLXLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPLYDEPFFVIV
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TTT
TT


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TT
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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   170.........180.........190.........200.........210.........220.........230.........240........
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Query Sequence  AQHHPLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPAAIATQH.
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Template Sequence  PKGHSFEELDAVSPRXLGEEQVLLLTEGNCXRDQVLSSC. . . . . . . TNTLQGSSINTIRHXVASGLAISVLPATALTEND
Template Known Secondary structure  TT
GGGG
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SSGGGGS

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GGG

GGG
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   170.........180.........190.........200........ .210.........220.........230.........240..
 
   249250.........260.........270.........280........
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Query Sequence  . DGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALD
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Template Sequence  HXLFSIIPFEGTPPSRRVVLAYRRNFVRPKALSAXKAAIXQ
Template Known Secondary structure  GGT
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TT


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   255....260.........270.........280.........290.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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