Job Description P27111 Confidence 96.66% Date Thu Jan 5 11:43:09 GMT 2012 Rank 98 Aligned Residues 75 % Identity 15% Template c1p4xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue; PDBTitle: crystal structure of sars protein from staphylococcus aureus Resolution 2.20 Å

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																		.	.	.	.																																	.	.	.	.
Query SS confidence																		.	.	.	.																																	.	.	.	.
Query Sequence		M	L	S	R	H	I	N	Y	F	L	A	V	A	E	H	G	.	.	.	.	S	F	T	R	A	A	S	A	L	H	V	S	Q	P	A	L	S	Q	Q	I	R	Q	L	E	E	S	L	G	V	P	L	F	.	.	.	.	D	R	S	G	R	T	I	R	L	T	D	A	G	E	V	W	R	Q	Y	A	S	R	A	L
Query Conservation																		.	.	.	.																																	.	.	.	.
Alig confidence																		.	.	.	.																																	.	.	.	.
Template Conservation
Template Sequence		M	T	I	K	E	F	I	L	L	T	Y	L	F	H	Q	Q	E	N	T	L	P	F	K	K	I	V	S	D	L	C	Y	K	Q	S	D	L	V	Q	H	I	K	V	L	V	K	H	S	Y	I	S	K	V	R	S	K	I	D	E	R	N	T	Y	I	S	I	S	E	E	Q	R	E	K	I	A	E	R	V	T	L	F
Template Known Secondary structure		S													S		S		S											S	S	S		G	G	G	T										T	T	S							S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		73	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		112	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions