Job Description Q47005 Confidence 97.44% Date Thu Jan 5 12:36:08 GMT 2012 Rank 78 Aligned Residues 79 % Identity 8% Template d3broa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators Resolution 2.04

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																		.	.	.	.																																							.	.	.	.
Query SS confidence																		.	.	.	.																																							.	.	.	.
Query Sequence		M	N	F	R	R	L	K	Y	F	V	K	I	V	D	I	G	.	.	.	.	S	L	T	Q	A	A	E	V	L	H	I	A	Q	P	A	L	S	Q	Q	V	A	T	L	E	G	E	L	N	Q	Q	L	L	I	R	T	K	R	G	.	.	.	.	V	T	P	T	D	A	G	K	I	L	Y	T	H	A	R	A	I	L
Query Conservation																		.	.	.	.																																							.	.	.	.
Alig confidence																		.	.	.	.																																							.	.	.	.
Template Conservation
Template Sequence		L	T	G	T	Q	X	T	I	I	D	Y	L	S	R	N	K	N	K	E	V	L	Q	R	D	L	E	S	E	F	S	I	K	S	S	T	A	T	V	L	L	Q	R	X	E	I	K	K	L	L	Y	R	K	V	S	G	K	D	S	R	Q	K	C	L	K	L	T	K	K	A	N	K	L	E	T	I	I	L	S	Y	X
Template Known Secondary structure																T	T	T	S			B									T																T	T	S							S	S		T	T	S											T	T
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	C	E	Q	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	D	Q	S	Q	X
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions