Job Description Q47005 Confidence 55.95% Date Thu Jan 5 12:36:08 GMT 2012 Rank 314 Aligned Residues 197 % Identity 11% Template d1xs5a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.85

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	G	Q	V	S	I	G	F	A	P	G	T	A	A	S	S	I	T	M	P	L	L	Q	A	V	R	A	E	F	P	E	I	V	I	Y	L	H	E	N	S	G	A	V	L	N	E	K	L	I	N	H	Q	L	D	M	A	V	I	Y	E	H	S	P	V	A	G	V	S	S	Q	A	L	L	K	E	D	L	F	L
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		K	D	E	T	V	G	V	G	V	L	S	E	P	H	A	R	L	L	E	.	.	I	A	K	E	E	V	K	K	Q	H	I	E	L	R	I	V	E	F	T	N	Y	V	A	L	N	E	A	V	M	R	G	D	I	L	M	N	F	F	Q	H	V	P	H	M	Q	Q	F	N	Q	E	H	N	G	D	L	V	S	V	G
Template Known Secondary structure												S	T	T							.	.								T	T	T									S												T	S	S	S																		T
Template Predicted Secondary structure																					.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		169	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.																			.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	T	Q	D	C	P	.	.	.	.	G	Q	S	V	D	V	N	A	I	A	Q	M	N	L	F	L	P	S	D	Y	S	A	I	R	L	R	V	D	E	A	F	S	L	R	R	L	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	I	G	E	I	E	S	I	A	T	L	T
Query Conservation									.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	V	H	V	E	P	L	A	L	Y	S	R	T	Y	R	H	V	S	D	F	P	A	G	A	V	I	A	I	P	N	D	S	S	N	E	A	R	A	L	R	L	L	E	A	A	G	F	I	R	M	R	A	G	S	G	L	F	A	T	V	E	D	V	Q	Q	N	V	R	N	V	V	L	Q	E	V	E	S	A	L	L
Template Known Secondary structure													S	S			S	G	G	G			T	T								S														T	T	S					T	T			T	T			G	G	G					T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	I	A	S	G	M	G	V	A	V	L	P	E	S	A	A	R	S	L	C	G	A	V	N	G	W	M	S	R	I	T	T	P	S	M	S	L	S	L	S	L	N	L	P	A	R	A	N	L	S	P	Q	A	Q	A	V	K	E	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	V	F	D	Q	V	D	G	A	V	I	N	G	N	Y	A	I	M	A	G	L	S	A	R	R	D	G	L	A	V	E	P	D	A	S	A	Y	A	N	V	L	V	V	K	R	G	N	E	A	D	A	R	V	Q	A	V	L	R	A	L
Template Known Secondary structure					G	G	G	S	S												T	T			T	T	T	T		S				S		G	G	G	G								T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions