Return to main results Retrieve Phyre Job Id

Job DescriptionQ47005
Confidence82.14%DateThu Jan 5 12:36:08 GMT 2012
Rank219Aligned Residues40
% Identity10%Templated1vz0a1
SCOP infoDNA/RNA-binding 3-helical bundle KorB DNA-binding domain-like KorB DNA-binding domain-like
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10...... ...20.........30.........40
Predicted Secondary structure 

.
.



Query SS confidence 

.













.























Query Sequence  MN. FRRLKYFVKIVDIG. SLTQAAEVLHIAQPALSQQVATLE
Query Conservation 

.
  
  
  
   
.
 
 

  
 


 


  
  

Alig confidence 

.













.























Template Conservation 
 


 
 
   
   
 
   

  

 
   
   
 

 
Template Sequence  LSPVEEARGYQALLEMGLTQEEVARRVGKARSTVANALRLLQ
Template Known Secondary structure 

TT

T

GGG
Template Predicted Secondary structure 








Template SS confidence 









































   118.120.........130.........140.........150.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions