Job Description Q47005 Confidence 95.92% Date Thu Jan 5 12:36:08 GMT 2012 Rank 119 Aligned Residues 81 % Identity 7% Template d1sfxa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like Resolution 1.55

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																		.	.																																.								.	.
Query SS confidence																		.	.																																.								.	.
Query Sequence		M	N	F	R	R	L	K	Y	F	V	K	I	V	D	I	G	.	.	S	L	T	Q	A	A	E	V	L	H	I	A	Q	P	A	L	S	Q	Q	V	A	T	L	E	G	E	L	N	Q	Q	L	.	L	I	R	T	K	R	G	.	.	V	T	P	T	D	A	G	K	I	L	Y	T	H	A	R	A	I	L	R	Q	C
Query Conservation																		.	.																																.								.	.
Alig confidence																		.	.																																.								.	.
Template Conservation
Template Sequence		F	K	P	S	D	V	R	I	Y	S	L	L	L	E	R	G	G	X	R	V	S	E	I	A	R	E	L	D	L	S	A	R	F	V	R	D	R	L	K	V	L	L	K	R	G	F	V	R	R	E	I	V	E	K	G	W	V	G	Y	I	Y	S	A	E	K	P	E	K	V	L	K	E	F	K	S	S	I	L	G	E
Template Known Secondary structure																			B										T																T	T	S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		76	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	A	Q	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	R	I	E	K
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions